MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:88792832-89042956

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm10634	9	88745262 to 88830918	85656	+	antisense lncRNA gene	predicted gene 10634
Gm37614	9	88826604 to 88826813	209	-	unclassified gene	predicted gene, 37614
Gm29562	9	88827522 to 88828425	903	+	lincRNA gene	predicted gene 29562
Trim43c	9	88839164 to 88848190	9026	+	protein coding gene	tripartite motif-containing 43C
9330159M07Rik	9	88841798 to 88858870	17072	-	lncRNA gene	RIKEN cDNA 9330159M07 gene
Tssr90834	9	88845616 to 88845629	13	-	TSS region	transcription start site region 90834
Gm9775	9	88856756 to 88857086	330	+	pseudogene	predicted gene 9775
Gm26135	9	88857693 to 88857764	71	-	snoRNA gene	predicted gene, 26135
Cpgi22120	9	88858790 to 88859150	360		CpG island	CpG island 22120
Gm26611	9	88859011 to 88883554	24543	+	lincRNA gene	predicted gene, 26611
Gm2396	9	88878994 to 88937342	58348	-	unclassified non-coding RNA gene	predicted gene 2396
Gm23707	9	88917832 to 88917956	124	+	snoRNA gene	predicted gene, 23707
Bcl2a1a	9	88956920 to 88962416	5496	+	protein coding gene	B cell leukemia/lymphoma 2 related protein A1a
Tssr86418	9	88956979 to 88957003	24	+	TSS region	transcription start site region 86418
Tssr86419	9	88957011 to 88957022	11	+	TSS region	transcription start site region 86419
Tssr86420	9	88957024 to 88957036	12	+	TSS region	transcription start site region 86420
Tssr90835	9	88959103 to 88959110	7	-	TSS region	transcription start site region 90835
Gm37833	9	88980921 to 88984176	3255	+	unclassified gene	predicted gene, 37833
Gm37993	9	88985191 to 88986178	987	+	unclassified gene	predicted gene, 37993