Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:8878989-9599001

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr83789 9 8899828 to 8899855 27 + TSS region transcription start site region 83789
Pgr 9 8899833 to 8968611 68778 + protein coding gene progesterone receptor
Cpgi21348 9 8900152 to 8902198 2046 CpG island CpG island 21348
Tssr83790 9 8900409 to 8900425 16 + TSS region transcription start site region 83790
Tssr83791 9 8900459 to 8900489 30 + TSS region transcription start site region 83791
Tssr83792 9 8900490 to 8900502 12 + TSS region transcription start site region 83792
Tssr83793 9 8900563 to 8900574 11 + TSS region transcription start site region 83793
Tssr83794 9 8901535 to 8901549 14 + TSS region transcription start site region 83794
Tssr83795 9 8901699 to 8901784 85 + TSS region transcription start site region 83795
Gm16485 9 8971791 to 8975773 3982 + protein coding gene predicted gene 16485
Arhgap42 9 8994329 to 9239101 244772 - protein coding gene Rho GTPase activating protein 42
D9Mit218 9 9025264 to 9025387 123 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 218
D9Mit249 9 9107561 to 9107685 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 249
Mdq19 9 9141014 to 9141014 0 QTL mammary ductal QTL 19
Tssr88123 9 9142423 to 9142427 4 - TSS region transcription start site region 88123
Tssr88124 9 9227503 to 9227507 4 - TSS region transcription start site region 88124
Gm16833 9 9236288 to 9260883 24595 + antisense lncRNA gene predicted gene, 16833
Cpgi21349 9 9238483 to 9239490 1007 CpG island CpG island 21349
Tssr88125 9 9238950 to 9238964 14 - TSS region transcription start site region 88125
Tssr88126 9 9238989 to 9239001 12 - TSS region transcription start site region 88126
Tssr88127 9 9239019 to 9239042 23 - TSS region transcription start site region 88127
Tssr88128 9 9239052 to 9239095 43 - TSS region transcription start site region 88128
Tssr88129 9 9239107 to 9239124 17 - TSS region transcription start site region 88129
Tssr88130 9 9269358 to 9269396 38 - TSS region transcription start site region 88130
Gm22815 9 9301391 to 9301452 61 + snRNA gene predicted gene, 22815
Gm47333 9 9434592 to 9434893 301 + pseudogene predicted gene, 47333
Tssr83796 9 9434628 to 9434653 25 + TSS region transcription start site region 83796
Gm47334 9 9564087 to 9583564 19477 + lincRNA gene predicted gene, 47334
Gm46102 9 9579337 to 9619784 40447 - lincRNA gene predicted gene, 46102
Sles4 9 37395074 to 9107561 -28287513 QTL systemic lupus erythmatosus suppressor 4