Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:88403909-88473936

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snx14 9 88376750 to 88438958 62208 - protein coding gene sorting nexin 14
Gm20537 9 88407432 to 88456616 49184 - protein coding gene predicted gene 20537
Tssr90815 9 88436600 to 88436624 24 - TSS region transcription start site region 90815
Cpgi22115 9 88438298 to 88439441 1143 CpG island CpG island 22115
4932427H20Rik 9 88438597 to 88441186 2589 protein coding gene RIKEN cDNA 4932427H20 gene
Tssr90816 9 88438885 to 88438892 7 - TSS region transcription start site region 90816
Tssr90817 9 88438909 to 88438936 27 - TSS region transcription start site region 90817
Tssr90818 9 88438940 to 88438947 7 - TSS region transcription start site region 90818
Gm28229 9 88441500 to 88443652 2152 - sense intronic lncRNA gene predicted gene 28229
Tssr90819 9 88444080 to 88444084 4 - TSS region transcription start site region 90819
2810019C22Rik 9 88447907 to 88448942 1035 unclassified gene RIKEN cDNA 2810019C22 gene
Syncrip 9 88449364 to 88482397 33033 - protein coding gene synaptotagmin binding, cytoplasmic RNA interacting protein
Tssr90820 9 88454265 to 88454291 26 - TSS region transcription start site region 90820
D9Ertd306e 9 88459142 to 88459350 208 DNA segment DNA segment, Chr 9, ERATO Doi 306, expressed
Tssr90821 9 88461022 to 88461026 4 - TSS region transcription start site region 90821
Tssr90822 9 88462990 to 88463002 12 - TSS region transcription start site region 90822
Tssr90823 9 88463012 to 88463024 12 - TSS region transcription start site region 90823