Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:88366750-88448958

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nt5e	9	88327609 to 88372089	44480	+	protein coding gene	5' nucleotidase, ecto
Snx14	9	88376750 to 88438958	62208	-	protein coding gene	sorting nexin 14
Tssr90812	9	88380184 to 88380188	4	-	TSS region	transcription start site region 90812
Tssr90813	9	88380208 to 88380233	25	-	TSS region	transcription start site region 90813
Tssr90814	9	88380244 to 88380262	18	-	TSS region	transcription start site region 90814
Tssr86411	9	88390801 to 88390802	1	+	TSS region	transcription start site region 86411
Gm10163	9	88390837 to 88391317	480	+	pseudogene	predicted pseudogene 10163
Gm20537	9	88407432 to 88456616	49184	-	protein coding gene	predicted gene 20537
Tssr90815	9	88436600 to 88436624	24	-	TSS region	transcription start site region 90815
Cpgi22115	9	88438298 to 88439441	1143		CpG island	CpG island 22115
4932427H20Rik	9	88438597 to 88441186	2589		protein coding gene	RIKEN cDNA 4932427H20 gene
Tssr90816	9	88438885 to 88438892	7	-	TSS region	transcription start site region 90816
Tssr90817	9	88438909 to 88438936	27	-	TSS region	transcription start site region 90817
Tssr90818	9	88438940 to 88438947	7	-	TSS region	transcription start site region 90818
Gm28229	9	88441500 to 88443652	2152	-	sense intronic lncRNA gene	predicted gene 28229
Tssr90819	9	88444080 to 88444084	4	-	TSS region	transcription start site region 90819
2810019C22Rik	9	88447907 to 88448942	1035		unclassified gene	RIKEN cDNA 2810019C22 gene