Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:87885969-88406557

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnbs1 9 85897510 to 87944172 2046662 QTL tri-nitrobenzene sulfonic acid susceptible 1
Gm25528 9 87888456 to 87888587 131 - snoRNA gene predicted gene, 25528
D9Mit269 9 87944001 to 87944172 171 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 269
Gm23176 9 88021420 to 88021549 129 - snoRNA gene predicted gene, 23176
Gm28877 9 88039089 to 88039692 603 - pseudogene predicted gene 28877
Gm2324 9 88121295 to 88122765 1470 - pseudogene predicted gene 2324
Gm5368 9 88145969 to 88146557 588 + pseudogene predicted gene 5368
D9Mit291 9 88234126 to 88234235 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 291
Gm28231 9 88259895 to 88263035 3140 + lincRNA gene predicted gene 28231
Tssr90810 9 88273336 to 88273345 9 - TSS region transcription start site region 90810
Tssr90811 9 88273365 to 88273376 11 - TSS region transcription start site region 90811
Tssr2962 9 88273581 to 88273602 21 + TSS region transcription start site region 2962
Tssr2963 9 88274072 to 88274109 37 - TSS region transcription start site region 2963
Gm5066 9 88280369 to 88281190 821 - pseudogene predicted gene 5066
Cpgi22113 9 88286599 to 88286804 205 CpG island CpG island 22113
Gm47620 9 88286724 to 88287153 429 + pseudogene predicted gene, 47620
Tssr86405 9 88286795 to 88286815 20 + TSS region transcription start site region 86405
Cpgi22114 9 88327021 to 88327977 956 CpG island CpG island 22114
Tssr86406 9 88327035 to 88327045 10 + TSS region transcription start site region 86406
Tssr86407 9 88327592 to 88327622 30 + TSS region transcription start site region 86407
Nt5e 9 88327609 to 88372089 44480 + protein coding gene 5' nucleotidase, ecto
Tssr86408 9 88327627 to 88327630 3 + TSS region transcription start site region 86408
Tssr86409 9 88327632 to 88327663 31 + TSS region transcription start site region 86409
Tssr86410 9 88359222 to 88359228 6 + TSS region transcription start site region 86410
Snx14 9 88376750 to 88438958 62208 - protein coding gene sorting nexin 14
Tssr90812 9 88380184 to 88380188 4 - TSS region transcription start site region 90812
Tssr90813 9 88380208 to 88380233 25 - TSS region transcription start site region 90813
Tssr90814 9 88380244 to 88380262 18 - TSS region transcription start site region 90814
Tssr86411 9 88390801 to 88390802 1 + TSS region transcription start site region 86411
Gm10163 9 88390837 to 88391317 480 + pseudogene predicted pseudogene 10163