Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:86959577-87485536

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39389 9 86954959 to 86962806 7847 - lncRNA gene predicted gene, 39389
Gm36539 9 86981991 to 87006163 24172 - lincRNA gene predicted gene, 36539
Cpgi22107 9 87015174 to 87016214 1040 CpG island CpG island 22107
Ripply2 9 87015537 to 87019917 4380 + protein coding gene ripply transcriptional repressor 2
Cpgi22108 9 87021870 to 87022464 594 CpG island CpG island 22108
Cyb5r4 9 87022014 to 87077774 55760 + protein coding gene cytochrome b5 reductase 4
Tssr86403 9 87022018 to 87022080 62 + TSS region transcription start site region 86403
Gm8282 9 87127086 to 87127547 461 + pseudogene predicted gene 8282
Cpgi22109 9 87144090 to 87144860 770 CpG island CpG island 22109
Tssr86404 9 87144285 to 87144317 32 + TSS region transcription start site region 86404
Mrap2 9 87144306 to 87184045 39739 + protein coding gene melanocortin 2 receptor accessory protein 2
D9Mit9.2 9 87178064 to 87178186 122 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 9.2
D9Mit271.1 9 87178980 to 87179089 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 271.1
D9Mit271 9 87179037 to 87179139 102 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 271
D9Mit271.2 9 87179122 to 87179249 127 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 271.2
Gm37012 9 87188336 to 87189413 1077 - unclassified gene predicted gene, 37012
Cep162 9 87189577 to 87255536 65959 - protein coding gene centrosomal protein 162
Gm24649 9 87200109 to 87200242 133 + rRNA gene predicted gene, 24649
Tssr90801 9 87209907 to 87209929 22 - TSS region transcription start site region 90801
Tssr90802 9 87209937 to 87209945 8 - TSS region transcription start site region 90802
Cpgi22110 9 87255092 to 87255677 585 CpG island CpG island 22110
Tssr90803 9 87255463 to 87255535 72 - TSS region transcription start site region 90803
Gm9540 9 87394250 to 87394727 477 + pseudogene predicted gene 9540