Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:86580640-86810656

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smgd1 9 65923774 to 86695914 20772140 QTL submucosal gland distribution 1
Me1 9 86581363 to 86695914 114551 - protein coding gene malic enzyme 1, NADP(+)-dependent, cytosolic
Tssr90785 9 86587613 to 86587619 6 - TSS region transcription start site region 90785
D9Mit135 9 86648657 to 86648794 137 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 135
D9Ertd305e 9 86651873 to 86652091 218 DNA segment DNA segment, Chr 9, ERATO Doi 305, expressed
Gm38230 9 86684050 to 86685208 1158 - unclassified gene predicted gene, 38230
Cpgi22104 9 86695213 to 86696369 1156 CpG island CpG island 22104
A330041J22Rik 9 86695460 to 86701253 5793 + antisense lncRNA gene RIKEN cDNA A330041J22 gene
Tssr90786 9 86695640 to 86695656 16 - TSS region transcription start site region 90786
Tssr90787 9 86695670 to 86695678 8 - TSS region transcription start site region 90787
Tssr90788 9 86695771 to 86695789 18 - TSS region transcription start site region 90788
Tssr90789 9 86695838 to 86695854 16 - TSS region transcription start site region 90789
Tssr90790 9 86695897 to 86695958 61 - TSS region transcription start site region 90790
Gm25949 9 86699043 to 86699156 113 - snRNA gene predicted gene, 25949
Tssr86398 9 86701426 to 86701476 50 + TSS region transcription start site region 86398
Gm22138 9 86703819 to 86703946 127 + snoRNA gene predicted gene, 22138
Gm37484 9 86712004 to 86714526 2522 + unclassified gene predicted gene, 37484
Tssr86399 9 86743248 to 86743281 33 + TSS region transcription start site region 86399
Tssr86400 9 86743616 to 86743638 22 + TSS region transcription start site region 86400
Tssr86401 9 86743641 to 86743654 13 + TSS region transcription start site region 86401
Prss35 9 86743649 to 86758443 14794 + protein coding gene protease, serine 35
Tssr2957 9 86743660 to 86743669 9 + TSS region transcription start site region 2957
Cpgi22105 9 86755991 to 86756438 447 CpG island CpG island 22105
Tssr86402 9 86757869 to 86757871 2 + TSS region transcription start site region 86402
Snap91 9 86765923 to 86880654 114731 - protein coding gene synaptosomal-associated protein 91
Gm37941 9 86784547 to 86786855 2308 - unclassified gene predicted gene, 37941
Tssr90791 9 86792030 to 86792041 11 - TSS region transcription start site region 90791
Tssr90792 9 86798877 to 86798884 7 - TSS region transcription start site region 90792
Tssr2958 9 86798914 to 86798933 19 - TSS region transcription start site region 2958
Ltw3 9 107920383 to 86581363 -21339020 heritable phenotypic marker liver 20-30 thousand Mol. Wt. protein 3