Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:86561363-86715914

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smgd1	9	65923774 to 86695914	20772140		QTL	submucosal gland distribution 1
Pgm3	9	86554377 to 86571842	17465	-	protein coding gene	phosphoglucomutase 3
Tssr90782	9	86571093 to 86571116	23	-	TSS region	transcription start site region 90782
Tssr90783	9	86571118 to 86571130	12	-	TSS region	transcription start site region 90783
Cpgi22103	9	86571437 to 86572490	1053		CpG island	CpG island 22103
Tssr90784	9	86571775 to 86571847	72	-	TSS region	transcription start site region 90784
Tssr86397	9	86571965 to 86572021	56	+	TSS region	transcription start site region 86397
Rwdd2a	9	86571991 to 86574899	2908	+	protein coding gene	RWD domain containing 2A
Me1	9	86581363 to 86695914	114551	-	protein coding gene	malic enzyme 1, NADP(+)-dependent, cytosolic
Tssr90785	9	86587613 to 86587619	6	-	TSS region	transcription start site region 90785
D9Mit135	9	86648657 to 86648794	137		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 135
D9Ertd305e	9	86651873 to 86652091	218		DNA segment	DNA segment, Chr 9, ERATO Doi 305, expressed
Gm38230	9	86684050 to 86685208	1158	-	unclassified gene	predicted gene, 38230
Cpgi22104	9	86695213 to 86696369	1156		CpG island	CpG island 22104
A330041J22Rik	9	86695460 to 86701253	5793	+	antisense lncRNA gene	RIKEN cDNA A330041J22 gene
Tssr90786	9	86695640 to 86695656	16	-	TSS region	transcription start site region 90786
Tssr90787	9	86695670 to 86695678	8	-	TSS region	transcription start site region 90787
Tssr90788	9	86695771 to 86695789	18	-	TSS region	transcription start site region 90788
Tssr90789	9	86695838 to 86695854	16	-	TSS region	transcription start site region 90789
Tssr90790	9	86695897 to 86695958	61	-	TSS region	transcription start site region 90790
Gm25949	9	86699043 to 86699156	113	-	snRNA gene	predicted gene, 25949
Tssr86398	9	86701426 to 86701476	50	+	TSS region	transcription start site region 86398
Gm22138	9	86703819 to 86703946	127	+	snoRNA gene	predicted gene, 22138
Gm37484	9	86712004 to 86714526	2522	+	unclassified gene	predicted gene, 37484
Ltw3	9	107920383 to 86581363	-21339020		heritable phenotypic marker	liver 20-30 thousand Mol. Wt. protein 3