Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:85884845-86594920

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Neogq1 9 57897764 to 86239920 28342156 QTL neonatal growth QTL 1
D9Mit196 9 85897510 to 85897652 142 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 196
Vtbt8 9 85897510 to 85897652 142 QTL vertebral trabecular bone trait 8
Bmd10 9 85897510 to 85897652 142 QTL bone mineral density 10
Tnbs1 9 85897510 to 87944172 2046662 QTL tri-nitrobenzene sulfonic acid susceptible 1
Gm47604 9 85941038 to 85943200 2162 - lincRNA gene predicted gene, 47604
D9Mit180 9 86166090 to 86166205 115 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 180
Gm18016 9 86173931 to 86174772 841 - pseudogene predicted gene, 18016
D9Mit11 9 86239845 to 86239920 75 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 11
Pas4 9 86239845 to 86239920 75 QTL pulmonary adenoma susceptibility 4
Ube2cbp 9 86307306 to 86464950 157644 - protein coding gene ubiquitin-conjugating enzyme E2C binding protein
Gm16202 9 86316149 to 86316691 542 - pseudogene predicted gene 16202
Tssr90779 9 86359598 to 86359602 4 - TSS region transcription start site region 90779
Cpgi22101 9 86464490 to 86465117 627 CpG island CpG island 22101
Tssr90780 9 86464900 to 86464943 43 - TSS region transcription start site region 90780
Tssr90781 9 86464944 to 86464958 14 - TSS region transcription start site region 90781
Cpgi22102 9 86466917 to 86467855 938 CpG island CpG island 22102
Dop1a 9 86467154 to 86555806 88652 + protein coding gene DOP1 leucine zipper like protein A
Tssr86391 9 86467163 to 86467170 7 + TSS region transcription start site region 86391
Tssr86392 9 86467173 to 86467219 46 + TSS region transcription start site region 86392
Tssr86393 9 86467224 to 86467261 37 + TSS region transcription start site region 86393
Tssr2956 9 86467959 to 86467964 5 + TSS region transcription start site region 2956
Tssr86394 9 86507128 to 86507132 4 + TSS region transcription start site region 86394
Tssr86395 9 86545230 to 86545242 12 + TSS region transcription start site region 86395
Tssr86396 9 86545256 to 86545269 13 + TSS region transcription start site region 86396
Hpic1 9 86546513 to 86546645 132 QTL haloperidol-induced catalepsy 1
D9Mit111 9 86546513 to 86546645 132 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 111
Gm17530 9 86546682 to 86547153 471 - protein coding gene predicted gene, 17530
Pgm3 9 86554377 to 86571842 17465 - protein coding gene phosphoglucomutase 3
Tssr90782 9 86571093 to 86571116 23 - TSS region transcription start site region 90782
Tssr90783 9 86571118 to 86571130 12 - TSS region transcription start site region 90783
Cpgi22103 9 86571437 to 86572490 1053 CpG island CpG island 22103
Tssr90784 9 86571775 to 86571847 72 - TSS region transcription start site region 90784
Tssr86397 9 86571965 to 86572021 56 + TSS region transcription start site region 86397
Rwdd2a 9 86571991 to 86574899 2908 + protein coding gene RWD domain containing 2A
Me1 9 86581363 to 86695914 114551 - protein coding gene malic enzyme 1, NADP(+)-dependent, cytosolic
Tssr90785 9 86587613 to 86587619 6 - TSS region transcription start site region 90785
Ltw3 9 107920383 to 86581363 -21339020 heritable phenotypic marker liver 20-30 thousand Mol. Wt. protein 3
Msam3 9 108641186 to 85897510 -22743676 QTL muscle, skeletal, activity measure 3
Dob2 9 120289624 to 86239845 -34049779 QTL dietary obesity 2