Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:84033619-85313623

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bckdhb 9 83925145 to 84124240 199095 + protein coding gene branched chain ketoacid dehydrogenase E1, beta polypeptide
Tssr86369 9 84037823 to 84037842 19 + TSS region transcription start site region 86369
Tssr86370 9 84037845 to 84037863 18 + TSS region transcription start site region 86370
Tssr86371 9 84041315 to 84041319 4 + TSS region transcription start site region 86371
Tssr86372 9 84045887 to 84045894 7 + TSS region transcription start site region 86372
Tssr86373 9 84049350 to 84049363 13 + TSS region transcription start site region 86373
Tssr86374 9 84053172 to 84053173 1 + TSS region transcription start site region 86374
D9Mit133 9 84091180 to 84091306 126 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 133
Tssr86375 9 84104228 to 84104233 5 + TSS region transcription start site region 86375
Tssr90762 9 84114480 to 84114508 28 - TSS region transcription start site region 90762
Heal29 9 84124167 to 84124167 0 QTL wound healing/regeneration 29
Gm26146 9 84188355 to 84188539 184 + snRNA gene predicted gene, 26146
Tssr86376 9 84234151 to 84234154 3 + TSS region transcription start site region 86376
Tssr86377 9 84239305 to 84239309 4 + TSS region transcription start site region 86377
Gm18487 9 84385456 to 84386555 1099 - pseudogene predicted gene, 18487
Tssr86378 9 84423949 to 84423957 8 + TSS region transcription start site region 86378
Gm8226 9 84423984 to 84424781 797 + pseudogene predicted gene 8226
Gm39388 9 84582141 to 84613493 31352 + lincRNA gene predicted gene, 39388
Gm26126 9 84649496 to 84649659 163 + snRNA gene predicted gene, 26126
Tssr86379 9 84652707 to 84652711 4 + TSS region transcription start site region 86379
Tssr2953 9 84673619 to 84673623 4 + TSS region transcription start site region 2953
Gm48811 9 84676576 to 84677002 426 - pseudogene predicted gene, 48811
D9Mit195 9 84771600 to 84771749 149 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 195
4930554C24Rik 9 84774398 to 84784351 9953 + lincRNA gene RIKEN cDNA 4930554C24 gene
Gm36366 9 84778796 to 84785030 6234 - lncRNA gene predicted gene, 36366
Gm48820 9 84858707 to 84862914 4207 + lincRNA gene predicted gene, 48820
Gm28625 9 84890545 to 84890749 204 + lincRNA gene predicted gene 28625
D9Nds1 9 84891404 to 84891581 177 DNA segment DNA segment, Chr 9, Nuffield Department of Surgery 1
Gm48821 9 84892120 to 84924633 32513 - lincRNA gene predicted gene, 48821
Gm8228 9 84972823 to 84976145 3322 - pseudogene predicted gene 8228
Tssr90763 9 85096589 to 85096625 36 - TSS region transcription start site region 90763
Gm28070 9 85104765 to 85105209 444 + pseudogene predicted gene 28070
Gm48830 9 85221196 to 85234582 13386 - lincRNA gene predicted gene, 48830
Gm48831 9 85238908 to 85240041 1133 - lincRNA gene predicted gene, 48831
Gm11114 9 85312773 to 85312860 87 + protein coding gene predicted gene 11114