Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:83858355-84518539

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttk 9 83834689 to 83872389 37700 + protein coding gene Ttk protein kinase
Tssr86361 9 83866561 to 83866570 9 + TSS region transcription start site region 86361
Gm39387 9 83880883 to 83897223 16340 - lncRNA gene predicted gene, 39387
Gm36278 9 83921821 to 83925005 3184 - lincRNA gene predicted gene, 36278
Cpgi22097 9 83924867 to 83925562 695 CpG island CpG island 22097
Tssr86362 9 83925118 to 83925175 57 + TSS region transcription start site region 86362
Bckdhb 9 83925145 to 84124240 199095 + protein coding gene branched chain ketoacid dehydrogenase E1, beta polypeptide
Tssr86363 9 83925183 to 83925194 11 + TSS region transcription start site region 86363
Gm29163 9 83938369 to 83938475 106 - snRNA gene predicted gene 29163
Tssr86364 9 83938463 to 83938467 4 + TSS region transcription start site region 86364
Tssr86365 9 83939068 to 83939083 15 + TSS region transcription start site region 86365
Tssr86366 9 83939124 to 83939137 13 + TSS region transcription start site region 86366
Gm29164 9 83965984 to 83967007 1023 - pseudogene predicted gene 29164
Tssr86367 9 84002999 to 84003002 3 + TSS region transcription start site region 86367
Tssr86368 9 84007492 to 84007495 3 + TSS region transcription start site region 86368
Gm46124 9 84009139 to 84024817 15678 - antisense lncRNA gene predicted gene, 46124
Tssr86369 9 84037823 to 84037842 19 + TSS region transcription start site region 86369
Tssr86370 9 84037845 to 84037863 18 + TSS region transcription start site region 86370
Tssr86371 9 84041315 to 84041319 4 + TSS region transcription start site region 86371
Tssr86372 9 84045887 to 84045894 7 + TSS region transcription start site region 86372
Tssr86373 9 84049350 to 84049363 13 + TSS region transcription start site region 86373
Tssr86374 9 84053172 to 84053173 1 + TSS region transcription start site region 86374
D9Mit133 9 84091180 to 84091306 126 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 133
Tssr86375 9 84104228 to 84104233 5 + TSS region transcription start site region 86375
Tssr90762 9 84114480 to 84114508 28 - TSS region transcription start site region 90762
Heal29 9 84124167 to 84124167 0 QTL wound healing/regeneration 29
Gm26146 9 84188355 to 84188539 184 + snRNA gene predicted gene, 26146
Tssr86376 9 84234151 to 84234154 3 + TSS region transcription start site region 86376
Tssr86377 9 84239305 to 84239309 4 + TSS region transcription start site region 86377
Gm18487 9 84385456 to 84386555 1099 - pseudogene predicted gene, 18487
Tssr86378 9 84423949 to 84423957 8 + TSS region transcription start site region 86378
Gm8226 9 84423984 to 84424781 797 + pseudogene predicted gene 8226