MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:83710342-83900343

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39385	9	83700481 to 83710981	10500	+	lncRNA gene	predicted gene, 39385
Gm39386	9	83726146 to 83728320	2174	+	lncRNA gene	predicted gene, 39386
Elovl4	9	83778692 to 83806277	27585	-	protein coding gene	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
Tssr90755	9	83779089 to 83779093	4	-	TSS region	transcription start site region 90755
Tssr90756	9	83805342 to 83805343	1	-	TSS region	transcription start site region 90756
Cpgi22095	9	83805355 to 83806705	1350		CpG island	CpG island 22095
Tssr90757	9	83806159 to 83806170	11	-	TSS region	transcription start site region 90757
Tssr90758	9	83806187 to 83806194	7	-	TSS region	transcription start site region 90758
Tssr90759	9	83806241 to 83806260	19	-	TSS region	transcription start site region 90759
Tssr90760	9	83806264 to 83806281	17	-	TSS region	transcription start site region 90760
Cpgi22096	9	83834348 to 83835045	697		CpG island	CpG island 22096
Tssr90761	9	83834543 to 83834566	23	-	TSS region	transcription start site region 90761
Tssr86358	9	83834645 to 83834668	23	+	TSS region	transcription start site region 86358
Tssr86359	9	83834684 to 83834736	52	+	TSS region	transcription start site region 86359
Ttk	9	83834689 to 83872389	37700	+	protein coding gene	Ttk protein kinase
Tssr86360	9	83843132 to 83843143	11	+	TSS region	transcription start site region 86360
Tssr86361	9	83866561 to 83866570	9	+	TSS region	transcription start site region 86361
Gm39387	9	83880883 to 83897223	16340	-	lncRNA gene	predicted gene, 39387