Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:83450481-83960981

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm2087 9 83431547 to 83454573 23026 + antisense lncRNA gene predicted gene 2087
Gm28552 9 83480032 to 83480419 387 + pseudogene predicted gene 28552
Gm28477 9 83497666 to 83498071 405 + pseudogene predicted gene 28477
Cpgi22094 9 83547891 to 83548749 858 CpG island CpG island 22094
Tssr86352 9 83548279 to 83548298 19 + TSS region transcription start site region 86352
Tssr86353 9 83548309 to 83548334 25 + TSS region transcription start site region 86353
Sh3bgrl2 9 83548338 to 83600292 51954 + protein coding gene SH3 domain binding glutamic acid-rich protein like 2
Tssr86354 9 83548342 to 83548357 15 + TSS region transcription start site region 86354
Gm39384 9 83571560 to 83573289 1729 - lincRNA gene predicted gene, 39384
Tssr90753 9 83587242 to 83587259 17 - TSS region transcription start site region 90753
Tssr86355 9 83587953 to 83587968 15 + TSS region transcription start site region 86355
Tssr86356 9 83587974 to 83587987 13 + TSS region transcription start site region 86356
Tssr90754 9 83613944 to 83613948 4 - TSS region transcription start site region 90754
Tssr86357 9 83664963 to 83664966 3 + TSS region transcription start site region 86357
Gm36120 9 83679389 to 83681643 2254 - lincRNA gene predicted gene, 36120
Gm2109 9 83691475 to 83693223 1748 + lincRNA gene predicted gene 2109
Gm39385 9 83700481 to 83710981 10500 + lncRNA gene predicted gene, 39385
Gm39386 9 83726146 to 83728320 2174 + lncRNA gene predicted gene, 39386
Elovl4 9 83778692 to 83806277 27585 - protein coding gene elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
Tssr90755 9 83779089 to 83779093 4 - TSS region transcription start site region 90755
Tssr90756 9 83805342 to 83805343 1 - TSS region transcription start site region 90756
Cpgi22095 9 83805355 to 83806705 1350 CpG island CpG island 22095
Tssr90757 9 83806159 to 83806170 11 - TSS region transcription start site region 90757
Tssr90758 9 83806187 to 83806194 7 - TSS region transcription start site region 90758
Tssr90759 9 83806241 to 83806260 19 - TSS region transcription start site region 90759
Tssr90760 9 83806264 to 83806281 17 - TSS region transcription start site region 90760
Cpgi22096 9 83834348 to 83835045 697 CpG island CpG island 22096
Tssr90761 9 83834543 to 83834566 23 - TSS region transcription start site region 90761
Tssr86358 9 83834645 to 83834668 23 + TSS region transcription start site region 86358
Tssr86359 9 83834684 to 83834736 52 + TSS region transcription start site region 86359
Ttk 9 83834689 to 83872389 37700 + protein coding gene Ttk protein kinase
Tssr86360 9 83843132 to 83843143 11 + TSS region transcription start site region 86360
Tssr86361 9 83866561 to 83866570 9 + TSS region transcription start site region 86361
Gm39387 9 83880883 to 83897223 16340 - lncRNA gene predicted gene, 39387
Gm36278 9 83921821 to 83925005 3184 - lincRNA gene predicted gene, 36278
Cpgi22097 9 83924867 to 83925562 695 CpG island CpG island 22097
Tssr86362 9 83925118 to 83925175 57 + TSS region transcription start site region 86362
Bckdhb 9 83925145 to 84124240 199095 + protein coding gene branched chain ketoacid dehydrogenase E1, beta polypeptide
Tssr86363 9 83925183 to 83925194 11 + TSS region transcription start site region 86363
Gm29163 9 83938369 to 83938475 106 - snRNA gene predicted gene 29163
Tssr86364 9 83938463 to 83938467 4 + TSS region transcription start site region 86364
Tssr86365 9 83939068 to 83939083 15 + TSS region transcription start site region 86365
Tssr86366 9 83939124 to 83939137 13 + TSS region transcription start site region 86366