Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:83196276-83448800

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Mit307 9 83207024 to 83207122 98 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 307
Lith5 9 83207024 to 83207122 98 QTL lithogenic gene 5
Gm27216 9 83240481 to 83254540 14059 - lincRNA gene predicted gene 27216
Tssr90746 9 83250125 to 83250132 7 - TSS region transcription start site region 90746
Tssr90747 9 83250221 to 83250238 17 - TSS region transcription start site region 90747
Tssr90748 9 83254440 to 83254455 15 - TSS region transcription start site region 90748
Tssr90749 9 83254460 to 83254519 59 - TSS region transcription start site region 90749
Tssr2952 9 83254533 to 83254540 7 - TSS region transcription start site region 2952
D9Mit265 9 83315456 to 83315599 143 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 265
Gm46122 9 83316276 to 83328800 12524 + lncRNA gene predicted gene, 46122
Gm40536 9 83345038 to 83349706 4668 - lncRNA gene predicted gene, 40536
Gm46123 9 83351769 to 83353979 2210 + lincRNA gene predicted gene, 46123
Lca5 9 83391355 to 83441737 50382 - protein coding gene Leber congenital amaurosis 5 (human)
Tssr86350 9 83409619 to 83409621 2 + TSS region transcription start site region 86350
Rps27a-ps2 9 83409660 to 83410126 466 + pseudogene ribosomal protein S27A, pseudogene 2
Tssr86351 9 83431523 to 83431530 7 + TSS region transcription start site region 86351
Gm2087 9 83431547 to 83454573 23026 + antisense lncRNA gene predicted gene 2087
Tssr90750 9 83434608 to 83434614 6 - TSS region transcription start site region 90750
Cpgi22092 9 83440818 to 83441388 570 CpG island CpG island 22092
Tssr90751 9 83441065 to 83441110 45 - TSS region transcription start site region 90751
Gm37307 9 83447559 to 83450179 2620 + unclassified gene predicted gene, 37307
Cpgi22093 9 83447780 to 83448197 417 CpG island CpG island 22093
Tssr90752 9 83447957 to 83447975 18 - TSS region transcription start site region 90752