Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:83002572-83222594

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr86346 9 83008594 to 83008624 30 + TSS region transcription start site region 86346
Gm39383 9 83008603 to 83042603 34000 + lincRNA gene predicted gene, 39383
Tssr86347 9 83014855 to 83014864 9 + TSS region transcription start site region 86347
Tssr90739 9 83023987 to 83024007 20 - TSS region transcription start site region 90739
Gm35746 9 83068100 to 83072769 4669 - lncRNA gene predicted gene, 35746
Gm27248 9 83073223 to 83073388 165 - pseudogene predicted gene 27248
2810410P21Rik 9 83085969 to 83087996 2027 unclassified gene RIKEN cDNA 2810410P21 gene
Gm38398 9 83098224 to 83106330 8106 + lincRNA gene predicted gene, 38398
Tssr86348 9 83100655 to 83100677 22 + TSS region transcription start site region 86348
Hmgn3 9 83109948 to 83146685 36737 - protein coding gene high mobility group nucleosomal binding domain 3
Tssr90740 9 83112572 to 83112594 22 - TSS region transcription start site region 90740
Tssr86349 9 83112582 to 83112593 11 + TSS region transcription start site region 86349
Tssr90741 9 83112595 to 83112618 23 - TSS region transcription start site region 90741
Gm2065 9 83114108 to 83116864 2756 + lncRNA gene predicted gene 2065
D9Dcr21 9 83121465 to 83121560 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 21
Tssr90742 9 83141179 to 83141185 6 - TSS region transcription start site region 90742
Cpgi22091 9 83145670 to 83146809 1139 CpG island CpG island 22091
Gm29054 9 83145915 to 83147364 1449 + unclassified non-coding RNA gene predicted gene 29054
Tssr90743 9 83146501 to 83146506 5 - TSS region transcription start site region 90743
Tssr90744 9 83146528 to 83146588 60 - TSS region transcription start site region 90744
Tssr90745 9 83146601 to 83146614 13 - TSS region transcription start site region 90745
Gm38279 9 83174647 to 83175777 1130 - unclassified gene predicted gene, 38279
D9Mit307 9 83207024 to 83207122 98 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 307
Lith5 9 83207024 to 83207122 98 QTL lithogenic gene 5