Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:82059991-82990318

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mei4 9 81863670 to 82206007 342337 + protein coding gene meiotic double-stranded break formation protein 4
Gm19228 9 82196485 to 82197195 710 - pseudogene predicted gene, 19228
Gm15896 9 82202648 to 82203398 750 + pseudogene predicted gene 15896
Gm23748 9 82247848 to 82247978 130 + snoRNA gene predicted gene, 23748
Gm35548 9 82249931 to 82260208 10277 - lincRNA gene predicted gene, 35548
1700063H06Rik 9 82260293 to 82263485 3192 + lincRNA gene RIKEN cDNA 1700063H06 gene
Gm22836 9 82439414 to 82439474 60 - snRNA gene predicted gene, 22836
Gm24393 9 82463356 to 82463452 96 - snRNA gene predicted gene, 24393
Gm27249 9 82524991 to 82525318 327 + pseudogene predicted gene 27249
D9Dcr19 9 82533497 to 82533600 103 DNA segment DNA segment, Chr 9, Derry C. Roopenian 19
Gm35690 9 82541508 to 82559701 18193 + lncRNA gene predicted gene, 35690
D9Mit237 9 82813466 to 82813606 140 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 237
Cpgi22089 9 82829539 to 82830681 1142 CpG island CpG island 22089
Irak1bp1 9 82829806 to 82847688 17882 + protein coding gene interleukin-1 receptor-associated kinase 1 binding protein 1
Tssr86341 9 82829818 to 82829834 16 + TSS region transcription start site region 86341
Tssr86342 9 82829931 to 82829942 11 + TSS region transcription start site region 86342
Tssr86343 9 82829967 to 82830076 109 + TSS region transcription start site region 86343
Tssr86344 9 82830441 to 82830476 35 + TSS region transcription start site region 86344
Gm38553 9 82853079 to 82865332 12253 + lncRNA gene predicted gene, 38553
Phip 9 82866159 to 82975516 109357 - protein coding gene pleckstrin homology domain interacting protein
Tssr90724 9 82900801 to 82900844 43 - TSS region transcription start site region 90724
Tssr90725 9 82903149 to 82903177 28 - TSS region transcription start site region 90725
Tssr90726 9 82908037 to 82908042 5 - TSS region transcription start site region 90726
Tssr90727 9 82908713 to 82908755 42 - TSS region transcription start site region 90727
Tssr90728 9 82928873 to 82928882 9 - TSS region transcription start site region 90728
Tssr90729 9 82938141 to 82938146 5 - TSS region transcription start site region 90729
D9Dcr20 9 82946667 to 82946770 103 DNA segment DNA segment, Chr 9, Derry C. Roopenian 20
Tssr90730 9 82951466 to 82951475 9 - TSS region transcription start site region 90730
Gm39382 9 82959858 to 82966042 6184 - lncRNA gene predicted gene, 39382
Tssr90731 9 82971862 to 82971866 4 - TSS region transcription start site region 90731
Cpgi22090 9 82974147 to 82976123 1976 CpG island CpG island 22090
Tssr90732 9 82974282 to 82974318 36 - TSS region transcription start site region 90732
Tssr90733 9 82974952 to 82974987 35 - TSS region transcription start site region 90733
Tssr90734 9 82975114 to 82975153 39 - TSS region transcription start site region 90734
Tssr90735 9 82975379 to 82975396 17 - TSS region transcription start site region 90735
Tssr90736 9 82975407 to 82975466 59 - TSS region transcription start site region 90736
Tssr90737 9 82975475 to 82975493 18 - TSS region transcription start site region 90737
Tssr90738 9 82975695 to 82975732 37 - TSS region transcription start site region 90738
Tssr86345 9 82976171 to 82976175 4 + TSS region transcription start site region 86345
Tssr2951 9 82985910 to 82985911 1 + TSS region transcription start site region 2951