Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:80244995-81178723

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(9Bmp5-Myo6)5Rl 9 75775364 to 80311729 4536365 chromosomal inversion inversion, Chr 9, Russell 5
Myo6 9 80165031 to 80311729 146698 + protein coding gene myosin VI
Gm27227 9 80263306 to 80265450 2144 - antisense lncRNA gene predicted gene 27227
Tssr90714 9 80265407 to 80265416 9 - TSS region transcription start site region 90714
Tssr90715 9 80265421 to 80265433 12 - TSS region transcription start site region 90715
Tssr86326 9 80274727 to 80274733 6 + TSS region transcription start site region 86326
Tssr86327 9 80281491 to 80281499 8 + TSS region transcription start site region 86327
Tssr86328 9 80286331 to 80286348 17 + TSS region transcription start site region 86328
Tssr2949 9 80288108 to 80288133 25 + TSS region transcription start site region 2949
Tssr86329 9 80305745 to 80305756 11 + TSS region transcription start site region 86329
Tssr86330 9 80305765 to 80305776 11 + TSS region transcription start site region 86330
Tssr86331 9 80306957 to 80306972 15 + TSS region transcription start site region 86331
Tssr86332 9 80308194 to 80308197 3 + TSS region transcription start site region 86332
Tssr86333 9 80310716 to 80310720 4 + TSS region transcription start site region 86333
Impg1 9 80313330 to 80465481 152151 - protein coding gene interphotoreceptor matrix proteoglycan 1
Tssr90716 9 80344777 to 80344779 2 - TSS region transcription start site region 90716
Tssr86334 9 80399483 to 80399524 41 + TSS region transcription start site region 86334
Gm18292 9 80451248 to 80452166 918 + pseudogene predicted gene, 18292
D9Mit343 9 80463139 to 80463256 117 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 343
Tssr90717 9 80465429 to 80465445 16 - TSS region transcription start site region 90717
D9Dcr16 9 80510033 to 80510128 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 16
Gm48387 9 80544763 to 80601097 56334 - lincRNA gene predicted gene, 48387
D9Dcr17 9 80551800 to 80551895 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 17
Tssr86335 9 80681901 to 80681913 12 + TSS region transcription start site region 86335
Tssr2950 9 80696364 to 80696367 3 + TSS region transcription start site region 2950
Gm39380 9 80709995 to 80713723 3728 + lincRNA gene predicted gene, 39380
Gm27224 9 80802651 to 80864861 62210 + lincRNA gene predicted gene 27224
Gm27225 9 80926034 to 80927213 1179 - pseudogene predicted gene 27225
Gm26713 9 80955436 to 81203591 248155 + lincRNA gene predicted gene, 26713
Gm35397 9 80964215 to 80966464 2249 - lncRNA gene predicted gene, 35397
Gm39381 9 80970328 to 80993714 23386 - lncRNA gene predicted gene, 39381
Gm8151 9 81016098 to 81016946 848 - pseudogene predicted gene 8151