Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:80060079-80270086

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ksc1 9 75501755 to 80091050 4589295 QTL keratinocyte stem cell locus 1
Cpgi22085 9 80066607 to 80068247 1640 CpG island CpG island 22085
Tssr86309 9 80066753 to 80066764 11 + TSS region transcription start site region 86309
Tssr86310 9 80066895 to 80066936 41 + TSS region transcription start site region 86310
Senp6 9 80066903 to 80144782 77879 + protein coding gene SUMO/sentrin specific peptidase 6
Tssr86311 9 80066939 to 80066983 44 + TSS region transcription start site region 86311
Tssr86312 9 80066987 to 80067006 19 + TSS region transcription start site region 86312
Tssr86313 9 80067009 to 80067047 38 + TSS region transcription start site region 86313
Tssr86314 9 80067058 to 80067085 27 + TSS region transcription start site region 86314
Tssr86315 9 80067087 to 80067119 32 + TSS region transcription start site region 86315
Tssr86316 9 80067153 to 80067165 12 + TSS region transcription start site region 86316
Tssr90710 9 80067361 to 80067370 9 - TSS region transcription start site region 90710
Tssr86317 9 80067452 to 80067465 13 + TSS region transcription start site region 86317
Tssr90711 9 80067674 to 80067698 24 - TSS region transcription start site region 90711
Tssr90712 9 80067716 to 80067761 45 - TSS region transcription start site region 90712
Tssr90713 9 80067767 to 80067778 11 - TSS region transcription start site region 90713
Gm20648 9 80073429 to 80073756 327 - pseudogene predicted gene 20648
6720474J12Rik 9 80074206 to 80077626 3420 unclassified gene RIKEN cDNA 6720474J12 gene
D9Mit236 9 80090911 to 80091050 139 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 236
Tssr86318 9 80111377 to 80111415 38 + TSS region transcription start site region 86318
Tssr86319 9 80112906 to 80112911 5 + TSS region transcription start site region 86319
Gm17477 9 80118895 to 80121937 3042 - antisense lncRNA gene predicted gene, 17477
Tssr86320 9 80126364 to 80126384 20 + TSS region transcription start site region 86320
Cpgi22086 9 80164389 to 80165418 1029 CpG island CpG island 22086
Tssr86321 9 80164995 to 80164998 3 + TSS region transcription start site region 86321
Tssr86322 9 80165002 to 80165010 8 + TSS region transcription start site region 86322
Tssr86323 9 80165013 to 80165055 42 + TSS region transcription start site region 86323
Myo6 9 80165031 to 80311729 146698 + protein coding gene myosin VI
Tssr86324 9 80165061 to 80165076 15 + TSS region transcription start site region 86324
Tssr86325 9 80165079 to 80165086 7 + TSS region transcription start site region 86325
Gm27227 9 80263306 to 80265450 2144 - antisense lncRNA gene predicted gene 27227
Tssr90714 9 80265407 to 80265416 9 - TSS region transcription start site region 90714
Tssr90715 9 80265421 to 80265433 12 - TSS region transcription start site region 90715