Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:79770018-80012882

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem30a 9 79768941 to 79793430 24489 - protein coding gene transmembrane protein 30A
Tssr90684 9 79770387 to 79770428 41 - TSS region transcription start site region 90684
Cpgi22080 9 79792767 to 79793787 1020 CpG island CpG island 22080
Tssr90685 9 79792850 to 79792883 33 - TSS region transcription start site region 90685
Tssr86306 9 79792953 to 79792995 42 + TSS region transcription start site region 86306
Tssr90686 9 79793290 to 79793372 82 - TSS region transcription start site region 90686
Tssr90687 9 79793378 to 79793409 31 - TSS region transcription start site region 90687
Tssr90688 9 79793508 to 79793519 11 - TSS region transcription start site region 90688
Tssr90689 9 79793521 to 79793541 20 - TSS region transcription start site region 90689
Tssr90690 9 79793545 to 79793571 26 - TSS region transcription start site region 90690
Tssr86307 9 79793627 to 79793670 43 + TSS region transcription start site region 86307
4930429F24Rik 9 79793641 to 79803235 9594 + lincRNA gene RIKEN cDNA 4930429F24 gene
Filip1 9 79805018 to 79977882 172864 - protein coding gene filamin A interacting protein 1
Tssr90691 9 79811152 to 79811158 6 - TSS region transcription start site region 90691
Cpgi22081 9 79817919 to 79818270 351 CpG island CpG island 22081
Cpgi22082 9 79818776 to 79818971 195 CpG island CpG island 22082
Tssr90692 9 79830964 to 79830981 17 - TSS region transcription start site region 90692
Tssr90693 9 79830998 to 79831017 19 - TSS region transcription start site region 90693
Tssr90694 9 79831022 to 79831034 12 - TSS region transcription start site region 90694
Gm20477 9 79838108 to 79838387 279 - pseudogene predicted gene 20477
Tssr90695 9 79860338 to 79860365 27 - TSS region transcription start site region 90695
Cpgi22083 9 79875515 to 79875675 160 CpG island CpG island 22083
Gm3211 9 79913200 to 79913631 431 + unclassified non-coding RNA gene predicted gene 3211
Gm35261 9 79927052 to 79935739 8687 + lncRNA gene predicted gene, 35261
Tssr90696 9 79961961 to 79961976 15 - TSS region transcription start site region 90696
Tssr90697 9 79961983 to 79962001 18 - TSS region transcription start site region 90697
Tssr90698 9 79962018 to 79962031 13 - TSS region transcription start site region 90698
Tssr90699 9 79962045 to 79962088 43 - TSS region transcription start site region 90699
Tssr90700 9 79977540 to 79977549 9 - TSS region transcription start site region 90700
Tssr90701 9 79977574 to 79977585 11 - TSS region transcription start site region 90701
Tssr90702 9 79977628 to 79977633 5 - TSS region transcription start site region 90702
Tssr90703 9 79977638 to 79977662 24 - TSS region transcription start site region 90703
Tssr90704 9 79977684 to 79977702 18 - TSS region transcription start site region 90704
Tssr90705 9 79977782 to 79977809 27 - TSS region transcription start site region 90705
Tssr90706 9 79977810 to 79977836 26 - TSS region transcription start site region 90706
Tssr90707 9 79977838 to 79977861 23 - TSS region transcription start site region 90707
Tssr90708 9 80004059 to 80004077 18 - TSS region transcription start site region 90708
Tssr86308 9 80004212 to 80004238 26 + TSS region transcription start site region 86308
Gm8131 9 80004327 to 80005449 1122 + pseudogene predicted gene 8131
Cpgi22084 9 80005167 to 80005396 229 CpG island CpG island 22084
Tssr90709 9 80012851 to 80012855 4 - TSS region transcription start site region 90709