Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:78397865-78498786

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ddx43 9 78395777 to 78423587 27810 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
D9Mit264 9 78415657 to 78415777 120 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 264
Gm8093 9 78427454 to 78429988 2534 + pseudogene predicted gene 8093
Cpgi22066 9 78427458 to 78427799 341 CpG island CpG island 22066
Tssr86285 9 78427686 to 78427707 21 + TSS region transcription start site region 86285
Tssr86286 9 78429060 to 78429076 16 + TSS region transcription start site region 86286
Cgas 9 78430526 to 78443237 12711 - protein coding gene cyclic GMP-AMP synthase
Cpgi22067 9 78442416 to 78443441 1025 CpG island CpG island 22067
Tssr90640 9 78442853 to 78442869 16 - TSS region transcription start site region 90640
Tssr90641 9 78443076 to 78443117 41 - TSS region transcription start site region 90641
Tssr90642 9 78443159 to 78443175 16 - TSS region transcription start site region 90642
Tssr90643 9 78443221 to 78443253 32 - TSS region transcription start site region 90643
Gm17324 9 78447865 to 78448786 921 - protein coding gene predicted gene, 17324
Mto1 9 78447870 to 78474165 26295 + protein coding gene mitochondrial tRNA translation optimization 1
Cpgi22068 9 78447980 to 78448924 944 CpG island CpG island 22068
Tssr86287 9 78448192 to 78448228 36 + TSS region transcription start site region 86287
Eef1a1 9 78478453 to 78481724 3271 - protein coding gene eukaryotic translation elongation factor 1 alpha 1
Gm26377 9 78478528 to 78478635 107 - miRNA gene predicted gene, 26377
Tssr90644 9 78479048 to 78479068 20 - TSS region transcription start site region 90644
Tssr86288 9 78479651 to 78479653 2 + TSS region transcription start site region 86288
Cpgi22069 9 78480728 to 78482282 1554 CpG island CpG island 22069
Tssr90645 9 78480736 to 78480782 46 - TSS region transcription start site region 90645
Tssr90646 9 78480798 to 78480818 20 - TSS region transcription start site region 90646
Tssr90647 9 78481657 to 78481714 57 - TSS region transcription start site region 90647
Tssr90648 9 78481724 to 78481751 27 - TSS region transcription start site region 90648
Tssr86289 9 78482013 to 78482036 23 + TSS region transcription start site region 86289
Tssr86290 9 78482061 to 78482077 16 + TSS region transcription start site region 86290
Tssr90649 9 78488116 to 78488147 31 - TSS region transcription start site region 90649
Tssr90650 9 78489141 to 78489166 25 - TSS region transcription start site region 90650