Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:77971938-78131948

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Elovl5 9 77917365 to 77984519 67154 + protein coding gene ELOVL family member 5, elongation of long chain fatty acids (yeast)
Tssr86240 9 77976762 to 77976773 11 + TSS region transcription start site region 86240
Tssr86241 9 77976842 to 77976854 12 + TSS region transcription start site region 86241
Tssr86242 9 77976882 to 77976893 11 + TSS region transcription start site region 86242
Tssr90618 9 77976911 to 77976913 2 - TSS region transcription start site region 90618
Tssr86243 9 77979830 to 77979841 11 + TSS region transcription start site region 86243
Tssr86244 9 77979879 to 77979892 13 + TSS region transcription start site region 86244
Tssr86245 9 77979918 to 77979925 7 + TSS region transcription start site region 86245
Tssr86246 9 77981506 to 77981524 18 + TSS region transcription start site region 86246
Tssr86247 9 77982680 to 77982687 7 + TSS region transcription start site region 86247
Tssr86248 9 77982688 to 77982698 10 + TSS region transcription start site region 86248
Tssr86249 9 77982721 to 77982730 9 + TSS region transcription start site region 86249
Tssr86250 9 77982856 to 77982863 7 + TSS region transcription start site region 86250
Tssr86251 9 77982999 to 77983033 34 + TSS region transcription start site region 86251
Tssr86252 9 77983154 to 77983165 11 + TSS region transcription start site region 86252
Tssr86253 9 77983517 to 77983547 30 + TSS region transcription start site region 86253
Tssr86254 9 77983571 to 77983582 11 + TSS region transcription start site region 86254
Tssr86255 9 77983782 to 77983800 18 + TSS region transcription start site region 86255
Gm34829 9 77992599 to 78002261 9662 + lincRNA gene predicted gene, 34829
Gm23609 9 78013972 to 78014098 126 - snoRNA gene predicted gene, 23609
Gm39375 9 78015018 to 78020703 5685 + lincRNA gene predicted gene, 39375
Gm47829 9 78027945 to 78028089 144 + pseudogene predicted gene, 47829
Tssr86256 9 78051938 to 78051948 10 + TSS region transcription start site region 86256
Gcm1 9 78051958 to 78065624 13666 + protein coding gene glial cells missing homolog 1
Gm8058 9 78068851 to 78069437 586 + pseudogene predicted gene 8058
Fbxo9 9 78081499 to 78109065 27566 - protein coding gene f-box protein 9
Cpgi22061 9 78107854 to 78109190 1336 CpG island CpG island 22061
Tssr90619 9 78108567 to 78108576 9 - TSS region transcription start site region 90619
Tssr90620 9 78108588 to 78108616 28 - TSS region transcription start site region 90620
Tssr90621 9 78108617 to 78108650 33 - TSS region transcription start site region 90621
Tssr90622 9 78109020 to 78109067 47 - TSS region transcription start site region 90622
Tssr86257 9 78109188 to 78109285 97 + TSS region transcription start site region 86257
Ick 9 78109192 to 78172107 62915 + protein coding gene intestinal cell kinase
Cpgi22062 9 78113123 to 78113629 506 CpG island CpG island 22062
Tssr86258 9 78113232 to 78113248 16 + TSS region transcription start site region 86258
Tssr86259 9 78113251 to 78113261 10 + TSS region transcription start site region 86259
Tssr86260 9 78113275 to 78113346 71 + TSS region transcription start site region 86260
Tssr86261 9 78113350 to 78113355 5 + TSS region transcription start site region 86261
Tssr86262 9 78113358 to 78113373 15 + TSS region transcription start site region 86262
Tssr86263 9 78113390 to 78113402 12 + TSS region transcription start site region 86263