Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:77427714-77727789

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc1 9 77430823 to 77544852 114029 - protein coding gene leucine rich repeat containing 1
D9Mit354 9 77434452 to 77434553 101 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 354
Tssr90607 9 77435129 to 77435158 29 - TSS region transcription start site region 90607
Tssr90608 9 77469947 to 77469963 16 - TSS region transcription start site region 90608
Cpgi22054 9 77469960 to 77470136 176 CpG island CpG island 22054
Tssr90609 9 77535508 to 77535519 11 - TSS region transcription start site region 90609
Cpgi22055 9 77543648 to 77545408 1760 CpG island CpG island 22055
Tssr90610 9 77544729 to 77544754 25 - TSS region transcription start site region 90610
Tssr90611 9 77544760 to 77544772 12 - TSS region transcription start site region 90611
Tssr90612 9 77544783 to 77544813 30 - TSS region transcription start site region 90612
Tssr90613 9 77544829 to 77544862 33 - TSS region transcription start site region 90613
Tssr90614 9 77544877 to 77544914 37 - TSS region transcription start site region 90614
Gm19569 9 77544959 to 77546467 1508 + unclassified non-coding RNA gene predicted gene, 19569
Gm21013 9 77552626 to 77553810 1184 - pseudogene predicted gene, 21013
Gm25250 9 77577714 to 77577789 75 + miRNA gene predicted gene, 25250
D9Dcr14 9 77593888 to 77593991 103 DNA segment DNA segment, Chr 9, Derry C. Roopenian 14
D9Mit306 9 77605380 to 77605484 104 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 306
Tssr86194 9 77636469 to 77636480 11 + TSS region transcription start site region 86194
Tssr86195 9 77636494 to 77636528 34 + TSS region transcription start site region 86195
Tssr86196 9 77636536 to 77636547 11 + TSS region transcription start site region 86196
Tssr86197 9 77636575 to 77636610 35 + TSS region transcription start site region 86197
Tssr86198 9 77636619 to 77636620 1 + TSS region transcription start site region 86198
Tssr86199 9 77636621 to 77636635 14 + TSS region transcription start site region 86199
Tssr86200 9 77636636 to 77636711 75 + TSS region transcription start site region 86200
Tssr86201 9 77636713 to 77636732 19 + TSS region transcription start site region 86201
Klhl31 9 77636732 to 77660125 23393 + protein coding gene kelch-like 31
Tssr86202 9 77652688 to 77652694 6 + TSS region transcription start site region 86202
Cpgi22056 9 77654799 to 77655958 1159 CpG island CpG island 22056
Tssr86203 9 77656665 to 77656685 20 + TSS region transcription start site region 86203
Tssr86204 9 77657394 to 77657399 5 + TSS region transcription start site region 86204
Gm47790 9 77692197 to 77730279 38082 - lincRNA gene predicted gene, 47790
Gm47789 9 77706558 to 77707882 1324 - lincRNA gene predicted gene, 47789
Tssr90615 9 77707847 to 77707871 24 - TSS region transcription start site region 90615