MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:77359947-77579963

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
5730403I07Rik	9	77366412 to 77399416	33004	-	lincRNA gene	RIKEN cDNA 5730403I07 gene
Tssr90606	9	77399308 to 77399353	45	-	TSS region	transcription start site region 90606
D9Ertd133e	9	77423699 to 77423913	214		DNA segment	DNA segment, Chr 9, ERATO Doi 133, expressed
Lrrc1	9	77430823 to 77544852	114029	-	protein coding gene	leucine rich repeat containing 1
D9Mit354	9	77434452 to 77434553	101		DNA segment	DNA Segment, Chr 9, Massachusetts Institute of Technology 354
Tssr90607	9	77435129 to 77435158	29	-	TSS region	transcription start site region 90607
Tssr90608	9	77469947 to 77469963	16	-	TSS region	transcription start site region 90608
Cpgi22054	9	77469960 to 77470136	176		CpG island	CpG island 22054
Tssr90609	9	77535508 to 77535519	11	-	TSS region	transcription start site region 90609
Cpgi22055	9	77543648 to 77545408	1760		CpG island	CpG island 22055
Tssr90610	9	77544729 to 77544754	25	-	TSS region	transcription start site region 90610
Tssr90611	9	77544760 to 77544772	12	-	TSS region	transcription start site region 90611
Tssr90612	9	77544783 to 77544813	30	-	TSS region	transcription start site region 90612
Tssr90613	9	77544829 to 77544862	33	-	TSS region	transcription start site region 90613
Tssr90614	9	77544877 to 77544914	37	-	TSS region	transcription start site region 90614
Gm19569	9	77544959 to 77546467	1508	+	unclassified non-coding RNA gene	predicted gene, 19569
Gm21013	9	77552626 to 77553810	1184	-	pseudogene	predicted gene, 21013
Gm25250	9	77577714 to 77577789	75	+	miRNA gene	predicted gene, 25250