Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:77293888-77893991

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mlip 9 77102084 to 77352781 250697 - protein coding gene muscular LMNA-interacting protein
Gm27210 9 77294838 to 77295239 401 - pseudogene predicted gene 27210
Gm38254 9 77302067 to 77303075 1008 - unclassified gene predicted gene, 38254
Tssr86193 9 77313721 to 77313725 4 + TSS region transcription start site region 86193
Tssr90601 9 77323828 to 77323832 4 - TSS region transcription start site region 90601
Tssr90602 9 77347768 to 77347782 14 - TSS region transcription start site region 90602
Tssr90603 9 77347787 to 77347815 28 - TSS region transcription start site region 90603
Tssr90604 9 77347816 to 77347887 71 - TSS region transcription start site region 90604
Tssr90605 9 77347889 to 77347906 17 - TSS region transcription start site region 90605
4930590H14Rik 9 77357352 to 77357902 550 + unclassified gene RIKEN cDNA 4930590H14 gene
5730403I07Rik 9 77366412 to 77399416 33004 - lincRNA gene RIKEN cDNA 5730403I07 gene
Tssr90606 9 77399308 to 77399353 45 - TSS region transcription start site region 90606
D9Ertd133e 9 77423699 to 77423913 214 DNA segment DNA segment, Chr 9, ERATO Doi 133, expressed
Lrrc1 9 77430823 to 77544852 114029 - protein coding gene leucine rich repeat containing 1
D9Mit354 9 77434452 to 77434553 101 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 354
Tssr90607 9 77435129 to 77435158 29 - TSS region transcription start site region 90607
Tssr90608 9 77469947 to 77469963 16 - TSS region transcription start site region 90608
Cpgi22054 9 77469960 to 77470136 176 CpG island CpG island 22054
Tssr90609 9 77535508 to 77535519 11 - TSS region transcription start site region 90609
Cpgi22055 9 77543648 to 77545408 1760 CpG island CpG island 22055
Tssr90610 9 77544729 to 77544754 25 - TSS region transcription start site region 90610
Tssr90611 9 77544760 to 77544772 12 - TSS region transcription start site region 90611
Tssr90612 9 77544783 to 77544813 30 - TSS region transcription start site region 90612
Tssr90613 9 77544829 to 77544862 33 - TSS region transcription start site region 90613
Tssr90614 9 77544877 to 77544914 37 - TSS region transcription start site region 90614
Gm19569 9 77544959 to 77546467 1508 + unclassified non-coding RNA gene predicted gene, 19569
Gm21013 9 77552626 to 77553810 1184 - pseudogene predicted gene, 21013
Gm25250 9 77577714 to 77577789 75 + miRNA gene predicted gene, 25250
D9Dcr14 9 77593888 to 77593991 103 DNA segment DNA segment, Chr 9, Derry C. Roopenian 14
D9Mit306 9 77605380 to 77605484 104 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 306
Tssr86194 9 77636469 to 77636480 11 + TSS region transcription start site region 86194
Tssr86195 9 77636494 to 77636528 34 + TSS region transcription start site region 86195
Tssr86196 9 77636536 to 77636547 11 + TSS region transcription start site region 86196
Tssr86197 9 77636575 to 77636610 35 + TSS region transcription start site region 86197
Tssr86198 9 77636619 to 77636620 1 + TSS region transcription start site region 86198
Tssr86199 9 77636621 to 77636635 14 + TSS region transcription start site region 86199
Tssr86200 9 77636636 to 77636711 75 + TSS region transcription start site region 86200
Tssr86201 9 77636713 to 77636732 19 + TSS region transcription start site region 86201
Klhl31 9 77636732 to 77660125 23393 + protein coding gene kelch-like 31
Tssr86202 9 77652688 to 77652694 6 + TSS region transcription start site region 86202
Cpgi22056 9 77654799 to 77655958 1159 CpG island CpG island 22056
Tssr86203 9 77656665 to 77656685 20 + TSS region transcription start site region 86203
Tssr86204 9 77657394 to 77657399 5 + TSS region transcription start site region 86204
Gm47790 9 77692197 to 77730279 38082 - lincRNA gene predicted gene, 47790
Gm47789 9 77706558 to 77707882 1324 - lincRNA gene predicted gene, 47789
Tssr90615 9 77707847 to 77707871 24 - TSS region transcription start site region 90615
Gm47795 9 77730737 to 77733268 2531 - lincRNA gene predicted gene, 47795
Tssr90616 9 77733283 to 77733289 6 - TSS region transcription start site region 90616
Cpgi22057 9 77750268 to 77751352 1084 CpG island CpG island 22057
Cpgi22058 9 77754387 to 77755221 834 CpG island CpG island 22058
Tssr86205 9 77754526 to 77754541 15 + TSS region transcription start site region 86205
Gclc 9 77754535 to 77794485 39950 + protein coding gene glutamate-cysteine ligase, catalytic subunit
Tssr86206 9 77754548 to 77754620 72 + TSS region transcription start site region 86206
Tssr86207 9 77784294 to 77784309 15 + TSS region transcription start site region 86207
Tssr86208 9 77784653 to 77784656 3 + TSS region transcription start site region 86208
Tssr86209 9 77784692 to 77784704 12 + TSS region transcription start site region 86209
Gm34654 9 77807036 to 77809793 2757 - lincRNA gene predicted gene, 34654
Gm47818 9 77836030 to 77848111 12081 + lincRNA gene predicted gene, 47818
Tssr86210 9 77838830 to 77838837 7 + TSS region transcription start site region 86210
Tssr86211 9 77838848 to 77838855 7 + TSS region transcription start site region 86211
Tssr86212 9 77838867 to 77838879 12 + TSS region transcription start site region 86212
Tssr86213 9 77838892 to 77838894 2 + TSS region transcription start site region 86213
Gm19572 9 77851708 to 77852045 337 + pseudogene predicted gene, 19572