Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:7669755-7859789

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mmp20 9 7628231 to 7674968 46737 + protein coding gene matrix metallopeptidase 20 (enamelysin)
AV064505 9 7669429 to 7695631 26202 - antisense lncRNA gene expressed sequence AV064505
Gm19212 9 7688974 to 7689823 849 - pseudogene predicted gene, 19212
Tssr83753 9 7692086 to 7692103 17 + TSS region transcription start site region 83753
Mmp7 9 7692090 to 7699585 7495 + protein coding gene matrix metallopeptidase 7
Tssr83754 9 7692339 to 7692366 27 + TSS region transcription start site region 83754
D9Mit57 9 7694215 to 7694379 164 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 57
Tssr83755 9 7695261 to 7695274 13 + TSS region transcription start site region 83755
Tssr83756 9 7699504 to 7699515 11 + TSS region transcription start site region 83756
Tssr2761 9 7699912 to 7699915 3 + TSS region transcription start site region 2761
Cbx3-ps8 9 7723147 to 7723694 547 + pseudogene chromobox 3, pseudogene 8
Gm10709 9 7751725 to 7752204 479 + pseudogene predicted gene 10709
Cpgi21341 9 7763642 to 7764883 1241 CpG island CpG island 21341
Tssr88084 9 7763748 to 7763761 13 - TSS region transcription start site region 88084
Tssr88085 9 7763762 to 7763775 13 - TSS region transcription start site region 88085
Tssr83757 9 7764058 to 7764177 119 + TSS region transcription start site region 83757
Tmem123 9 7764077 to 7794333 30256 + protein coding gene transmembrane protein 123
Tssr83758 9 7764179 to 7764190 11 + TSS region transcription start site region 83758
Tssr83759 9 7764200 to 7764211 11 + TSS region transcription start site region 83759
Tssr88086 9 7764755 to 7764789 34 - TSS region transcription start site region 88086
Tssr83760 9 7767772 to 7767801 29 + TSS region transcription start site region 83760
Mir5618 9 7784390 to 7784440 50 + miRNA gene microRNA 5618
Tssr83761 9 7786796 to 7786803 7 + TSS region transcription start site region 83761
Tssr83762 9 7790974 to 7791023 49 + TSS region transcription start site region 83762
Tssr83763 9 7792679 to 7792695 16 + TSS region transcription start site region 83763
Tssr83764 9 7792717 to 7792739 22 + TSS region transcription start site region 83764
Tssr83765 9 7793297 to 7793312 15 + TSS region transcription start site region 83765
Birc2 9 7818227 to 7837064 18837 - protein coding gene baculoviral IAP repeat-containing 2
Cpgi21342 9 7836425 to 7837595 1170 CpG island CpG island 21342
Tssr88087 9 7836799 to 7836810 11 - TSS region transcription start site region 88087
Tssr88088 9 7836836 to 7836850 14 - TSS region transcription start site region 88088
Tssr88089 9 7836860 to 7836883 23 - TSS region transcription start site region 88089
Tssr88090 9 7836889 to 7836910 21 - TSS region transcription start site region 88090
Tssr88091 9 7836961 to 7836974 13 - TSS region transcription start site region 88091
Tssr88092 9 7836980 to 7837096 116 - TSS region transcription start site region 88092
Tssr83766 9 7837136 to 7837152 16 + TSS region transcription start site region 83766
Tssr83767 9 7837161 to 7837243 82 + TSS region transcription start site region 83767
Birc3 9 7848699 to 7873186 24487 - protein coding gene baculoviral IAP repeat-containing 3
Tssr88093 9 7850630 to 7850657 27 - TSS region transcription start site region 88093