Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:76269186-77469483

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hcrtr2 9 76225880 to 76323578 97698 - protein coding gene hypocretin (orexin) receptor 2
D9Dcr13 9 76284406 to 76284501 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 13
Tssr86190 9 76312452 to 76312469 17 + TSS region transcription start site region 86190
Tssr86191 9 76312508 to 76312518 10 + TSS region transcription start site region 86191
Gm27234 9 76319577 to 76320846 1269 + antisense lncRNA gene predicted gene 27234
Cpgi22052 9 76323167 to 76323741 574 CpG island CpG island 22052
Tssr90575 9 76323559 to 76323586 27 - TSS region transcription start site region 90575
Tssr90576 9 76362117 to 76362128 11 - TSS region transcription start site region 90576
Tssr90577 9 76362164 to 76362176 12 - TSS region transcription start site region 90577
Skull13 9 76462664 to 76462846 182 QTL skull morphology 13
D9Mit8 9 76462664 to 76462846 182 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 8
Adip5 9 76462664 to 76462846 182 QTL adiposity 5
Mobq8 9 76462664 to 76462846 182 QTL multigenic obesity QTL 8
Fam83b 9 76490054 to 76567116 77062 - protein coding gene family with sequence similarity 83, member B
D9Mit266 9 76499817 to 76499941 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 266
Cpgi22053 9 76566926 to 76567533 607 CpG island CpG island 22053
Tssr90578 9 76567092 to 76567123 31 - TSS region transcription start site region 90578
Tssr90579 9 76567126 to 76567131 5 - TSS region transcription start site region 90579
Tssr90580 9 76581661 to 76581674 13 - TSS region transcription start site region 90580
Tssr90581 9 76582021 to 76582044 23 - TSS region transcription start site region 90581
Gm27156 9 76650381 to 76651134 753 + pseudogene predicted gene 27156
Gm27245 9 76658075 to 76658450 375 + pseudogene predicted gene 27245
Gm22938 9 76716628 to 76716747 119 - snoRNA gene predicted gene, 22938
Gm34158 9 76754762 to 76784854 30092 + lincRNA gene predicted gene, 34158
Gm27155 9 76760112 to 76761009 897 - pseudogene predicted gene 27155
Gm23791 9 76773232 to 76773524 292 - unclassified non-coding RNA gene predicted gene, 23791
Gm47800 9 76804116 to 76823062 18946 - lincRNA gene predicted gene, 47800
D9Mit261 9 76833945 to 76834094 149 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 261
Gm18486 9 76869186 to 76869483 297 - pseudogene predicted gene, 18486
Gm34210 9 76876152 to 76876265 113 - pseudogene predicted gene, 34210
Tinag 9 76951693 to 77045794 94101 - protein coding gene tubulointerstitial nephritis antigen
Gm27158 9 76989782 to 76990019 237 + pseudogene predicted gene 27158
Tssr90582 9 77045650 to 77045670 20 - TSS region transcription start site region 90582
Tssr90583 9 77045719 to 77045722 3 - TSS region transcription start site region 90583
Tssr90584 9 77045727 to 77045742 15 - TSS region transcription start site region 90584
Tssr90585 9 77045788 to 77045824 36 - TSS region transcription start site region 90585
Tssr90586 9 77046261 to 77046266 5 - TSS region transcription start site region 90586
Tssr86192 9 77046680 to 77046695 15 + TSS region transcription start site region 86192
Gm19541 9 77046682 to 77051953 5271 + lincRNA gene predicted gene, 19541
Tssr2944 9 77097052 to 77097082 30 + TSS region transcription start site region 2944
Gm5746 9 77097191 to 77099390 2199 + pseudogene predicted gene 5746
Mlip 9 77102084 to 77352781 250697 - protein coding gene muscular LMNA-interacting protein
Tssr90587 9 77128819 to 77128823 4 - TSS region transcription start site region 90587
Tssr90588 9 77200416 to 77200420 4 - TSS region transcription start site region 90588
Tssr90589 9 77223348 to 77223355 7 - TSS region transcription start site region 90589
Tssr90590 9 77229428 to 77229440 12 - TSS region transcription start site region 90590
Tssr90591 9 77229461 to 77229471 10 - TSS region transcription start site region 90591
Tssr90592 9 77230386 to 77230403 17 - TSS region transcription start site region 90592
Tssr90593 9 77230463 to 77230476 13 - TSS region transcription start site region 90593
Tssr90594 9 77251829 to 77251838 9 - TSS region transcription start site region 90594
Tssr90595 9 77251842 to 77251859 17 - TSS region transcription start site region 90595
Tssr90596 9 77251871 to 77251880 9 - TSS region transcription start site region 90596
Tssr90597 9 77252066 to 77252076 10 - TSS region transcription start site region 90597
Tssr90598 9 77261434 to 77261452 18 - TSS region transcription start site region 90598
Tssr90599 9 77261462 to 77261463 1 - TSS region transcription start site region 90599
Tssr90600 9 77261499 to 77261507 8 - TSS region transcription start site region 90600
D9Mit319 9 77288629 to 77288777 148 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-319
Gm27210 9 77294838 to 77295239 401 - pseudogene predicted gene 27210
Gm38254 9 77302067 to 77303075 1008 - unclassified gene predicted gene, 38254
Tssr86193 9 77313721 to 77313725 4 + TSS region transcription start site region 86193
Tssr90601 9 77323828 to 77323832 4 - TSS region transcription start site region 90601
Tssr90602 9 77347768 to 77347782 14 - TSS region transcription start site region 90602
Tssr90603 9 77347787 to 77347815 28 - TSS region transcription start site region 90603
Tssr90604 9 77347816 to 77347887 71 - TSS region transcription start site region 90604
Tssr90605 9 77347889 to 77347906 17 - TSS region transcription start site region 90605
4930590H14Rik 9 77357352 to 77357902 550 + unclassified gene RIKEN cDNA 4930590H14 gene
5730403I07Rik 9 77366412 to 77399416 33004 - lincRNA gene RIKEN cDNA 5730403I07 gene
Tssr90606 9 77399308 to 77399353 45 - TSS region transcription start site region 90606
D9Ertd133e 9 77423699 to 77423913 214 DNA segment DNA segment, Chr 9, ERATO Doi 133, expressed
Lrrc1 9 77430823 to 77544852 114029 - protein coding gene leucine rich repeat containing 1
D9Mit354 9 77434452 to 77434553 101 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 354
Tssr90607 9 77435129 to 77435158 29 - TSS region transcription start site region 90607