Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:75659855-76491350

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
l9Rl5 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 5
l9Rl6 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 6
l9Rl7 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 7
l9Rl1 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 1
l9Rl2 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 2
l9Rl3 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 3
l9Rl4 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 4
l9Rl8 9 75071015 to 75900310 829295 heritable phenotypic marker lethal, Chr 9, Russell 8
Scg3 9 75643189 to 75684056 40867 - protein coding gene secretogranin III
Gm37871 9 75666652 to 75667339 687 + unclassified gene predicted gene, 37871
Tssr90568 9 75683349 to 75683357 8 - TSS region transcription start site region 90568
Cpgi22050 9 75683640 to 75684317 677 CpG island CpG island 22050
Tssr90569 9 75683847 to 75683855 8 - TSS region transcription start site region 90569
Tssr90570 9 75683909 to 75683914 5 - TSS region transcription start site region 90570
Tssr90571 9 75683971 to 75683989 18 - TSS region transcription start site region 90571
Tssr90572 9 75683992 to 75684046 54 - TSS region transcription start site region 90572
Tssr90573 9 75684074 to 75684083 9 - TSS region transcription start site region 90573
Gm3671 9 75693653 to 75694659 1006 - pseudogene predicted gene 3671
Gm39373 9 75763525 to 75769160 5635 + lncRNA gene predicted gene, 39373
Tssr86186 9 75775355 to 75775378 23 + TSS region transcription start site region 86186
Bmp5 9 75775364 to 75900310 124946 + protein coding gene bone morphogenetic protein 5
In(9Bmp5-Myo6)5Rl 9 75775364 to 80311729 4536365 chromosomal inversion inversion, Chr 9, Russell 5
Tssr86187 9 75775668 to 75775687 19 + TSS region transcription start site region 86187
Tssr86188 9 75775694 to 75775715 21 + TSS region transcription start site region 86188
Gm47723 9 75876260 to 75877713 1453 + unclassified gene predicted gene, 47723
Gm26903 9 75897843 to 76015192 117349 - antisense lncRNA gene predicted gene, 26903
Gm44355 9 75911422 to 75911525 103 + miRNA gene predicted gene, 44355
Gm34005 9 75964204 to 75964485 281 + pseudogene predicted gene, 34005
Gm25300 9 75970944 to 75971027 83 - snRNA gene predicted gene, 25300
Tssr90574 9 75971025 to 75971031 6 - TSS region transcription start site region 90574
Hmgcll1 9 76014855 to 76136350 121495 + protein coding gene 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
Cpgi22051 9 76014862 to 76015252 390 CpG island CpG island 22051
Tssr86189 9 76014954 to 76015020 66 + TSS region transcription start site region 86189
D9Mit124 9 76066526 to 76066652 126 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 124
Gm38083 9 76067449 to 76070946 3497 + unclassified gene predicted gene, 38083
Stheal9 9 76117105 to 76117252 147 QTL soft tissue heal 9
D9Mit270 9 76117105 to 76117252 147 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 270
Fembrs6 9 76117105 to 76117252 147 QTL femur breaking strength 6
Gfral 9 76164102 to 76213657 49555 - protein coding gene GDNF family receptor alpha like
Hcrtr2 9 76225880 to 76323578 97698 - protein coding gene hypocretin (orexin) receptor 2
D9Mit122 9 76234058 to 76234202 144 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 122
D9Mit108 9 76234067 to 76234326 259 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 108
D9Dcr13 9 76284406 to 76284501 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 13
Tssr86190 9 76312452 to 76312469 17 + TSS region transcription start site region 86190
Tssr86191 9 76312508 to 76312518 10 + TSS region transcription start site region 86191
Gm27234 9 76319577 to 76320846 1269 + antisense lncRNA gene predicted gene 27234
Cpgi22052 9 76323167 to 76323741 574 CpG island CpG island 22052
Tssr90575 9 76323559 to 76323586 27 - TSS region transcription start site region 90575
Tssr90576 9 76362117 to 76362128 11 - TSS region transcription start site region 90576
Tssr90577 9 76362164 to 76362176 12 - TSS region transcription start site region 90577
D9Mit8 9 76462664 to 76462846 182 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 8
Adip5 9 76462664 to 76462846 182 QTL adiposity 5
Mobq8 9 76462664 to 76462846 182 QTL multigenic obesity QTL 8
Skull13 9 76462664 to 76462846 182 QTL skull morphology 13
Fam83b 9 76490054 to 76567116 77062 - protein coding gene family with sequence similarity 83, member B
Tbbmd4 9 101528921 to 76117105 -25411816 QTL total body bone mineral density 4
El1 9 114474379 to 75775364 -38699015 QTL epilepsy 1
El7 9 114474379 to 75775364 -38699015 QTL epilepsy 7