Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:75393616-75561681

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mapk6 9 75386782 to 75410019 23237 - protein coding gene mitogen-activated protein kinase 6
Tssr86167 9 75407018 to 75407028 10 + TSS region transcription start site region 86167
Tssr90539 9 75407903 to 75407907 4 - TSS region transcription start site region 90539
Tssr86168 9 75408054 to 75408079 25 + TSS region transcription start site region 86168
Tssr86169 9 75408086 to 75408099 13 + TSS region transcription start site region 86169
Tssr86170 9 75408115 to 75408124 9 + TSS region transcription start site region 86170
Tssr86171 9 75408324 to 75408328 4 + TSS region transcription start site region 86171
Cpgi22045 9 75408939 to 75410517 1578 CpG island CpG island 22045
Tssr90540 9 75409282 to 75409336 54 - TSS region transcription start site region 90540
Tssr90541 9 75409352 to 75409383 31 - TSS region transcription start site region 90541
Tssr90542 9 75409591 to 75409643 52 - TSS region transcription start site region 90542
Tssr90543 9 75409951 to 75410039 88 - TSS region transcription start site region 90543
Tssr86172 9 75410145 to 75410176 31 + TSS region transcription start site region 86172
4933433G15Rik 9 75410184 to 75415537 5353 + lincRNA gene RIKEN cDNA 4933433G15 gene
Tssr86173 9 75410203 to 75410217 14 + TSS region transcription start site region 86173
Tssr2942 9 75410209 to 75410220 11 - TSS region transcription start site region 2942
Tssr90544 9 75422401 to 75422445 44 - TSS region transcription start site region 90544
Tssr86174 9 75434343 to 75434354 11 + TSS region transcription start site region 86174
Tssr86175 9 75434437 to 75434442 5 + TSS region transcription start site region 86175
Tssr86176 9 75438125 to 75438130 5 + TSS region transcription start site region 86176
Cpgi22046 9 75441188 to 75442148 960 CpG island CpG island 22046
Tssr86177 9 75441478 to 75441489 11 + TSS region transcription start site region 86177
Tssr86178 9 75441518 to 75441575 57 + TSS region transcription start site region 86178
Leo1 9 75441524 to 75466432 24908 + protein coding gene Leo1, Paf1/RNA polymerase II complex component
Tssr86179 9 75468559 to 75468585 26 + TSS region transcription start site region 86179
Tssr86180 9 75468589 to 75468597 8 + TSS region transcription start site region 86180
Gm7972 9 75468616 to 75486681 18065 + pseudogene predicted gene 7972
Tmod3 9 75497784 to 75559687 61903 - protein coding gene tropomodulin 3
D9Mit262 9 75501755 to 75501893 138 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 262
Ksc1 9 75501755 to 80091050 4589295 QTL keratinocyte stem cell locus 1
Gm48789 9 75520374 to 75520502 128 - pseudogene predicted gene, 48789
Tssr2943 9 75538250 to 75538254 4 + TSS region transcription start site region 2943
Tssr90545 9 75541693 to 75541721 28 - TSS region transcription start site region 90545
Cpgi22047 9 75558989 to 75559843 854 CpG island CpG island 22047
Tssr90546 9 75559583 to 75559594 11 - TSS region transcription start site region 90546
Tssr90547 9 75559604 to 75559665 61 - TSS region transcription start site region 90547