MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:7422352-7590240

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mmp3	9	7445822 to 7455975	10153	+	protein coding gene	matrix metallopeptidase 3
Tssr83742	9	7445837 to 7445855	18	+	TSS region	transcription start site region 83742
Tssr83743	9	7464139 to 7464145	6	+	TSS region	transcription start site region 83743
Mmp1a	9	7464141 to 7476869	12728	+	polymorphic pseudogene	matrix metallopeptidase 1a (interstitial collagenase)
Tssr83744	9	7502340 to 7502345	5	+	TSS region	transcription start site region 83744
Mmp10	9	7502352 to 7510240	7888	+	protein coding gene	matrix metallopeptidase 10
Tssr88075	9	7556270 to 7556278	8	-	TSS region	transcription start site region 88075
Tssr2760	9	7558239 to 7558246	7	-	TSS region	transcription start site region 2760
Tssr83745	9	7558448 to 7558465	17	+	TSS region	transcription start site region 83745
Mmp8	9	7558456 to 7568485	10029	+	protein coding gene	matrix metallopeptidase 8
Gm31751	9	7558535 to 7622658	64123	-	lncRNA gene	predicted gene, 31751
Tssr83746	9	7560610 to 7560621	11	+	TSS region	transcription start site region 83746
Tssr83747	9	7561645 to 7561656	11	+	TSS region	transcription start site region 83747
Tssr83748	9	7566197 to 7566198	1	+	TSS region	transcription start site region 83748
Tssr83749	9	7567756 to 7567771	15	+	TSS region	transcription start site region 83749
Mmp27	9	7571396 to 7581885	10489	+	protein coding gene	matrix metallopeptidase 27
Tssr83750	9	7571457 to 7571489	32	+	TSS region	transcription start site region 83750
Tssr88076	9	7572741 to 7572752	11	-	TSS region	transcription start site region 88076