Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:73054521-74024635

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ibdq1 9 34067544 to 73531973 39464429 QTL inflammatory bowel disease QTL 1
Rab27a 9 73044854 to 73097629 52775 + protein coding gene RAB27A, member RAS oncogene family
Gm27186 9 73060951 to 73061257 306 + pseudogene predicted gene 27186
Tssr86080 9 73064142 to 73064157 15 + TSS region transcription start site region 86080
Tssr86081 9 73064165 to 73064181 16 + TSS region transcription start site region 86081
Tssr86082 9 73064438 to 73064442 4 + TSS region transcription start site region 86082
Tssr86083 9 73065861 to 73065885 24 + TSS region transcription start site region 86083
Tssr86084 9 73065895 to 73065910 15 + TSS region transcription start site region 86084
Tssr86085 9 73093962 to 73093970 8 + TSS region transcription start site region 86085
Tssr86086 9 73094826 to 73094834 8 + TSS region transcription start site region 86086
Tssr86087 9 73094844 to 73094854 10 + TSS region transcription start site region 86087
Cpgi22027 9 73095282 to 73095631 349 CpG island CpG island 22027
Tssr86088 9 73096611 to 73096615 4 + TSS region transcription start site region 86088
Khdc3 9 73101836 to 73104438 2602 + protein coding gene KH domain containing 3, subcortical maternal complex member
Tssr86089 9 73102443 to 73102469 26 + TSS region transcription start site region 86089
Gm20509 9 73102470 to 73117920 15450 + protein coding gene predicted gene 20509
Cpgi22028 9 73103221 to 73104041 820 CpG island CpG island 22028
Cpgi22029 9 73113119 to 73113899 780 CpG island CpG island 22029
Tssr90507 9 73113328 to 73113344 16 - TSS region transcription start site region 90507
Tssr90508 9 73113348 to 73113401 53 - TSS region transcription start site region 90508
Tssr86090 9 73113447 to 73113454 7 + TSS region transcription start site region 86090
Rsl24d1 9 73113469 to 73123333 9864 + protein coding gene ribosomal L24 domain containing 1
Tssr86091 9 73113658 to 73113668 10 + TSS region transcription start site region 86091
Tssr86092 9 73122982 to 73123015 33 + TSS region transcription start site region 86092
Tssr2936 9 73125255 to 73125261 6 + TSS region transcription start site region 2936
Tssr86093 9 73125387 to 73125396 9 + TSS region transcription start site region 86093
Gm38215 9 73132689 to 73134921 2232 + unclassified gene predicted gene, 38215
Tssr90509 9 73133014 to 73133042 28 - TSS region transcription start site region 90509
Gm5745 9 73175429 to 73175741 312 - pseudogene predicted gene 5745
Tssr86094 9 73192454 to 73192458 4 + TSS region transcription start site region 86094
Tssr86095 9 73192466 to 73192469 3 + TSS region transcription start site region 86095
Tssr86096 9 73192473 to 73192485 12 + TSS region transcription start site region 86096
Gm27211 9 73192483 to 73268115 75632 + lincRNA gene predicted gene 27211
Tssr86097 9 73192497 to 73192514 17 + TSS region transcription start site region 86097
D9Mit166 9 73215705 to 73215854 149 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 166
Tssr86098 9 73217302 to 73217305 3 + TSS region transcription start site region 86098
Tssr86099 9 73219450 to 73219456 6 + TSS region transcription start site region 86099
Gm39371 9 73339725 to 73342169 2444 + lncRNA gene predicted gene, 39371
D9Mit107 9 73467268 to 73467397 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 107
Unc13c 9 73479422 to 73968966 489544 - protein coding gene unc-13 homolog C
Adip21 9 73531826 to 73531973 147 QTL adiposity 21
D9Mit123 9 73531826 to 73531973 147 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 123
D9Mit341 9 73539521 to 73539635 114 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 341
Gm37611 9 73551843 to 73553870 2027 - unclassified gene predicted gene, 37611
Gm27148 9 73676533 to 73676692 159 - pseudogene predicted gene 27148
Gm25105 9 73795128 to 73795257 129 - snoRNA gene predicted gene, 25105
Tssr90510 9 73831282 to 73831287 5 - TSS region transcription start site region 90510
Gm37326 9 73857108 to 73860178 3070 - unclassified gene predicted gene, 37326
Tssr90511 9 73967811 to 73967822 11 - TSS region transcription start site region 90511
Tssr90512 9 73968670 to 73968709 39 - TSS region transcription start site region 90512
Tssr90513 9 73968901 to 73968999 98 - TSS region transcription start site region 90513
Tssr90514 9 73969031 to 73969045 14 - TSS region transcription start site region 90514
Tssr90515 9 73969058 to 73969072 14 - TSS region transcription start site region 90515
Tssr90516 9 73969099 to 73969109 10 - TSS region transcription start site region 90516
Tssr90517 9 73988236 to 73988250 14 - TSS region transcription start site region 90517
Tssr2937 9 74015878 to 74015879 1 - TSS region transcription start site region 2937