Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:72742741-72942774

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nedd4 9 72662347 to 72749848 87501 + protein coding gene neural precursor cell expressed, developmentally down-regulated 4
Tssr86039 9 72746432 to 72746452 20 + TSS region transcription start site region 86039
Tssr86040 9 72747995 to 72748025 30 + TSS region transcription start site region 86040
Tssr86041 9 72748960 to 72748980 20 + TSS region transcription start site region 86041
Tssr86042 9 72749012 to 72749034 22 + TSS region transcription start site region 86042
Tssr86043 9 72749096 to 72749114 18 + TSS region transcription start site region 86043
Tssr86044 9 72749301 to 72749314 13 + TSS region transcription start site region 86044
Tssr86045 9 72749375 to 72749393 18 + TSS region transcription start site region 86045
Tssr86046 9 72749416 to 72749443 27 + TSS region transcription start site region 86046
Tssr86047 9 72749549 to 72749574 25 + TSS region transcription start site region 86047
Cpgi22019 9 72766836 to 72767120 284 CpG island CpG island 22019
Gm27204 9 72774063 to 72776225 2162 - lincRNA gene predicted gene 27204
Cpgi22020 9 72806733 to 72807934 1201 CpG island CpG island 22020
Tssr86048 9 72807132 to 72807151 19 + TSS region transcription start site region 86048
Tssr86049 9 72807159 to 72807176 17 + TSS region transcription start site region 86049
Tssr86050 9 72807193 to 72807220 27 + TSS region transcription start site region 86050
Tssr86051 9 72807222 to 72807282 60 + TSS region transcription start site region 86051
Prtg 9 72807274 to 72917307 110033 + protein coding gene protogenin
Tssr86052 9 72807301 to 72807314 13 + TSS region transcription start site region 86052
Tssr86053 9 72807335 to 72807351 16 + TSS region transcription start site region 86053
D9Mit340 9 72816350 to 72816625 275 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 340
Gm27203 9 72827257 to 72827563 306 - pseudogene predicted gene 27203
Tssr86054 9 72842741 to 72842774 33 + TSS region transcription start site region 86054
Tssr86055 9 72856868 to 72856909 41 + TSS region transcription start site region 86055
A730062M13Rik 9 72869652 to 72871561 1909 + unclassified gene RIKEN cDNA A730062M13 gene
Tssr86056 9 72872432 to 72872433 1 + TSS region transcription start site region 86056
Gm37234 9 72889045 to 72890485 1440 + unclassified gene predicted gene, 37234
Cpgi22021 9 72912025 to 72912344 319 CpG island CpG island 22021
Tssr86057 9 72912772 to 72912777 5 + TSS region transcription start site region 86057
Cpgi22022 9 72924820 to 72926223 1403 CpG island CpG island 22022
Tssr86058 9 72925083 to 72925097 14 + TSS region transcription start site region 86058
Tssr86059 9 72925490 to 72925514 24 + TSS region transcription start site region 86059
Tssr86060 9 72925622 to 72925671 49 + TSS region transcription start site region 86060
Pygo1 9 72925650 to 72946015 20365 + protein coding gene pygopus 1