Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:72392255-72492261

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr90485 9 72393870 to 72393879 9 - TSS region transcription start site region 90485
Tssr90486 9 72393882 to 72393895 13 - TSS region transcription start site region 90486
Tssr90487 9 72393960 to 72393970 10 - TSS region transcription start site region 90487
Tssr85982 9 72394034 to 72394052 18 + TSS region transcription start site region 85982
Tssr85983 9 72394113 to 72394127 14 + TSS region transcription start site region 85983
Tssr85984 9 72394136 to 72394148 12 + TSS region transcription start site region 85984
Tssr85985 9 72394348 to 72394351 3 + TSS region transcription start site region 85985
Tssr85986 9 72395959 to 72395975 16 + TSS region transcription start site region 85986
Gm27230 9 72395974 to 72404510 8536 + lncRNA gene predicted gene 27230
Tssr85987 9 72396259 to 72396279 20 + TSS region transcription start site region 85987
Tssr85988 9 72396300 to 72396318 18 + TSS region transcription start site region 85988
Tssr85989 9 72396327 to 72396345 18 + TSS region transcription start site region 85989
Tssr85990 9 72396352 to 72396363 11 + TSS region transcription start site region 85990
Tssr90488 9 72400235 to 72400248 13 - TSS region transcription start site region 90488
Tssr85991 9 72400343 to 72400352 9 + TSS region transcription start site region 85991
Tssr85992 9 72400392 to 72400414 22 + TSS region transcription start site region 85992
Tssr85993 9 72400424 to 72400434 10 + TSS region transcription start site region 85993
Tssr85994 9 72401742 to 72401745 3 + TSS region transcription start site region 85994
Tssr90489 9 72403640 to 72403654 14 - TSS region transcription start site region 90489
Tssr90490 9 72407114 to 72407125 11 - TSS region transcription start site region 90490
Tssr85995 9 72408565 to 72408574 9 + TSS region transcription start site region 85995
Tssr85996 9 72408586 to 72408593 7 + TSS region transcription start site region 85996
BC065403 9 72408644 to 72409867 1223 - antisense lncRNA gene cDNA sequence BC065403
Gm27255 9 72409268 to 72409878 610 + lincRNA gene predicted gene 27255
Tssr90491 9 72409772 to 72409822 50 - TSS region transcription start site region 90491
Gm27254 9 72431127 to 72431643 516 - pseudogene predicted gene 27254
Tssr85997 9 72437985 to 72438016 31 + TSS region transcription start site region 85997
Cpgi22015 9 72438018 to 72438722 704 CpG island CpG island 22015
Mns1 9 72438517 to 72458581 20064 + protein coding gene meiosis-specific nuclear structural protein 1
Tssr85998 9 72438519 to 72438533 14 + TSS region transcription start site region 85998
Tssr85999 9 72438534 to 72438578 44 + TSS region transcription start site region 85999
Tssr86000 9 72438579 to 72438598 19 + TSS region transcription start site region 86000
Tssr86001 9 72438609 to 72438616 7 + TSS region transcription start site region 86001
Tssr86002 9 72438843 to 72438846 3 + TSS region transcription start site region 86002
Gm36948 9 72440760 to 72444006 3246 + unclassified gene predicted gene, 36948
Gm27231 9 72441079 to 72441779 700 - antisense lncRNA gene predicted gene 27231
Tssr86003 9 72442255 to 72442261 6 + TSS region transcription start site region 86003
D9Dcr10 9 72444021 to 72444116 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 10
Tssr86004 9 72448618 to 72448632 14 + TSS region transcription start site region 86004
Tssr86005 9 72448701 to 72448712 11 + TSS region transcription start site region 86005
Gm39370 9 72452826 to 72456539 3713 - lncRNA gene predicted gene, 39370
Tex9 9 72458055 to 72492686 34631 - protein coding gene testis expressed gene 9
Tssr86006 9 72461794 to 72461798 4 + TSS region transcription start site region 86006
Gm33004 9 72488082 to 72522201 34119 + lncRNA gene predicted gene, 33004
Cpgi22016 9 72491676 to 72492159 483 CpG island CpG island 22016
Tssr90492 9 72491950 to 72491989 39 - TSS region transcription start site region 90492
Tssr86007 9 72492041 to 72492067 26 + TSS region transcription start site region 86007