Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:72074987-72275004

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcf12 9 71844252 to 72111819 267567 - protein coding gene transcription factor 12
Tssr90469 9 72077487 to 72077501 14 - TSS region transcription start site region 90469
Tssr90470 9 72084748 to 72084752 4 - TSS region transcription start site region 90470
Tssr90471 9 72090254 to 72090287 33 - TSS region transcription start site region 90471
Tssr90472 9 72090394 to 72090398 4 - TSS region transcription start site region 90472
Tssr90473 9 72099376 to 72099380 4 - TSS region transcription start site region 90473
Cpgi22012 9 72110589 to 72112464 1875 CpG island CpG island 22012
Tssr90474 9 72110820 to 72110831 11 - TSS region transcription start site region 90474
Tssr90475 9 72110834 to 72110870 36 - TSS region transcription start site region 90475
Tssr90476 9 72110873 to 72110916 43 - TSS region transcription start site region 90476
Tssr90477 9 72110988 to 72110997 9 - TSS region transcription start site region 90477
Tssr90478 9 72111172 to 72111225 53 - TSS region transcription start site region 90478
Tssr85967 9 72111181 to 72111196 15 + TSS region transcription start site region 85967
Tssr90479 9 72111701 to 72111712 11 - TSS region transcription start site region 90479
Tssr90480 9 72111755 to 72111817 62 - TSS region transcription start site region 90480
Tssr90481 9 72111827 to 72111895 68 - TSS region transcription start site region 90481
Gm25045 9 72121806 to 72121904 98 - snRNA gene predicted gene, 25045
Gm7863 9 72128587 to 72129391 804 + pseudogene predicted gene 7863
Cpgi22013 9 72132631 to 72133783 1152 CpG island CpG island 22013
D9Mit75 9 72153056 to 72153196 140 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 75
Tssr90482 9 72154322 to 72154346 24 - TSS region transcription start site region 90482
Uba52-ps 9 72174580 to 72174958 378 - pseudogene ubitquitin A-52 residue ribosomal protein fusion product 1, pseudogene
Tssr90483 9 72174987 to 72175004 17 - TSS region transcription start site region 90483
Gm27159 9 72179183 to 72179758 575 - lincRNA gene predicted gene 27159
Gm27188 9 72207706 to 72230306 22600 - lincRNA gene predicted gene 27188
Gm7870 9 72209555 to 72210170 615 + pseudogene predicted gene 7870
Gm25163 9 72257036 to 72257139 103 - snRNA gene predicted gene, 25163
Gm27253 9 72268614 to 72274856 6242 - lincRNA gene predicted gene 27253
Tssr90484 9 72271324 to 72271327 3 - TSS region transcription start site region 90484
Cpgi22014 9 72274515 to 72275732 1217 CpG island CpG island 22014
Tssr85968 9 72274873 to 72274886 13 + TSS region transcription start site region 85968
Zfp280d 9 72274888 to 72363779 88891 + protein coding gene zinc finger protein 280D
Tssr85969 9 72274901 to 72274913 12 + TSS region transcription start site region 85969
Tssr85970 9 72274941 to 72274950 9 + TSS region transcription start site region 85970
Tssr85971 9 72274966 to 72275013 47 + TSS region transcription start site region 85971