Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:70488160-70598174

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf111 9 70425424 to 70503725 78301 - protein coding gene ring finger 111
Cpgi22001 9 70502962 to 70504029 1067 CpG island CpG island 22001
Tssr90412 9 70503329 to 70503378 49 - TSS region transcription start site region 90412
Tssr90413 9 70503718 to 70503805 87 - TSS region transcription start site region 90413
Tssr85904 9 70512207 to 70512220 13 + TSS region transcription start site region 85904
Tssr85905 9 70512224 to 70512244 20 + TSS region transcription start site region 85905
Gm23588 9 70517200 to 70517298 98 + snRNA gene predicted gene, 23588
Gm23730 9 70521598 to 70521704 106 - snRNA gene predicted gene, 23730
Tssr85906 9 70526880 to 70526892 12 + TSS region transcription start site region 85906
Gm22229 9 70537814 to 70537921 107 + snRNA gene predicted gene, 22229
Cpgi22002 9 70542209 to 70543503 1294 CpG island CpG island 22002
Tssr85907 9 70542393 to 70542416 23 + TSS region transcription start site region 85907
Tssr90414 9 70542679 to 70542691 12 - TSS region transcription start site region 90414
Tssr85908 9 70542742 to 70542827 85 + TSS region transcription start site region 85908
Sltm 9 70542754 to 70592234 49480 + protein coding gene SAFB-like, transcription modulator
Tssr85909 9 70542848 to 70542870 22 + TSS region transcription start site region 85909
Tssr85910 9 70542872 to 70542920 48 + TSS region transcription start site region 85910
Tssr85911 9 70543045 to 70543056 11 + TSS region transcription start site region 85911
Tssr90415 9 70543160 to 70543174 14 - TSS region transcription start site region 90415
Tssr85912 9 70543212 to 70543226 14 + TSS region transcription start site region 85912
Tssr85913 9 70543234 to 70543247 13 + TSS region transcription start site region 85913
9030411K21Rik 9 70549444 to 70550713 1269 unclassified non-coding RNA gene RIKEN cDNA 9030411K21 gene
Tssr85914 9 70573607 to 70573616 9 + TSS region transcription start site region 85914
Tssr85915 9 70576718 to 70576731 13 + TSS region transcription start site region 85915
Tssr85916 9 70576737 to 70576760 23 + TSS region transcription start site region 85916
Tssr85917 9 70576769 to 70576795 26 + TSS region transcription start site region 85917
Tssr85918 9 70579317 to 70579331 14 + TSS region transcription start site region 85918
Tssr85919 9 70579372 to 70579386 14 + TSS region transcription start site region 85919
Tssr85920 9 70580253 to 70580291 38 + TSS region transcription start site region 85920
Tssr85921 9 70580775 to 70580787 12 + TSS region transcription start site region 85921
Tssr85922 9 70580823 to 70580834 11 + TSS region transcription start site region 85922
Tssr85923 9 70581320 to 70581337 17 + TSS region transcription start site region 85923
Tssr90416 9 70585236 to 70585262 26 - TSS region transcription start site region 90416