Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:70403691-70843706

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mir5626 9 70405694 to 70405753 59 - miRNA gene microRNA 5626
Ccnb2 9 70407692 to 70421547 13855 - protein coding gene cyclin B2
Tssr90405 9 70413233 to 70413274 41 - TSS region transcription start site region 90405
Cpgi22000 9 70421166 to 70421713 547 CpG island CpG island 22000
Tssr90406 9 70421491 to 70421529 38 - TSS region transcription start site region 90406
Tssr90407 9 70421533 to 70421592 59 - TSS region transcription start site region 90407
Rnf111 9 70425424 to 70503725 78301 - protein coding gene ring finger 111
Tssr90408 9 70455669 to 70455673 4 - TSS region transcription start site region 90408
Tssr90409 9 70457883 to 70457899 16 - TSS region transcription start site region 90409
Gm24615 9 70475484 to 70475596 112 + snoRNA gene predicted gene, 24615
Tssr90410 9 70484802 to 70484811 9 - TSS region transcription start site region 90410
Tssr90411 9 70488117 to 70488120 3 - TSS region transcription start site region 90411
Cpgi22001 9 70502962 to 70504029 1067 CpG island CpG island 22001
Tssr90412 9 70503329 to 70503378 49 - TSS region transcription start site region 90412
Tssr90413 9 70503718 to 70503805 87 - TSS region transcription start site region 90413
Tssr85904 9 70512207 to 70512220 13 + TSS region transcription start site region 85904
Tssr85905 9 70512224 to 70512244 20 + TSS region transcription start site region 85905
Gm23588 9 70517200 to 70517298 98 + snRNA gene predicted gene, 23588
Gm23730 9 70521598 to 70521704 106 - snRNA gene predicted gene, 23730
Tssr85906 9 70526880 to 70526892 12 + TSS region transcription start site region 85906
Gm22229 9 70537814 to 70537921 107 + snRNA gene predicted gene, 22229
Cpgi22002 9 70542209 to 70543503 1294 CpG island CpG island 22002
Tssr85907 9 70542393 to 70542416 23 + TSS region transcription start site region 85907
Tssr90414 9 70542679 to 70542691 12 - TSS region transcription start site region 90414
Tssr85908 9 70542742 to 70542827 85 + TSS region transcription start site region 85908
Sltm 9 70542754 to 70592234 49480 + protein coding gene SAFB-like, transcription modulator
Tssr85909 9 70542848 to 70542870 22 + TSS region transcription start site region 85909
Tssr85910 9 70542872 to 70542920 48 + TSS region transcription start site region 85910
Tssr85911 9 70543045 to 70543056 11 + TSS region transcription start site region 85911
Tssr90415 9 70543160 to 70543174 14 - TSS region transcription start site region 90415
Tssr85912 9 70543212 to 70543226 14 + TSS region transcription start site region 85912
Tssr85913 9 70543234 to 70543247 13 + TSS region transcription start site region 85913
9030411K21Rik 9 70549444 to 70550713 1269 unclassified non-coding RNA gene RIKEN cDNA 9030411K21 gene
Tssr85914 9 70573607 to 70573616 9 + TSS region transcription start site region 85914
Tssr85915 9 70576718 to 70576731 13 + TSS region transcription start site region 85915
Tssr85916 9 70576737 to 70576760 23 + TSS region transcription start site region 85916
Tssr85917 9 70576769 to 70576795 26 + TSS region transcription start site region 85917
Tssr85918 9 70579317 to 70579331 14 + TSS region transcription start site region 85918
Tssr85919 9 70579372 to 70579386 14 + TSS region transcription start site region 85919
Tssr85920 9 70580253 to 70580291 38 + TSS region transcription start site region 85920
Tssr85921 9 70580775 to 70580787 12 + TSS region transcription start site region 85921
Tssr85922 9 70580823 to 70580834 11 + TSS region transcription start site region 85922
Tssr85923 9 70581320 to 70581337 17 + TSS region transcription start site region 85923
Tssr90416 9 70585236 to 70585262 26 - TSS region transcription start site region 90416
Mindy2 9 70599014 to 70657174 58160 - protein coding gene MINDY lysine 48 deubiquitinase 2
Tssr90417 9 70623691 to 70623706 15 - TSS region transcription start site region 90417
Tssr90418 9 70641400 to 70641403 3 - TSS region transcription start site region 90418
Tssr90419 9 70656134 to 70656138 4 - TSS region transcription start site region 90419
Tssr85924 9 70656229 to 70656245 16 + TSS region transcription start site region 85924
Tssr85925 9 70656248 to 70656261 13 + TSS region transcription start site region 85925
Gm10642 9 70656251 to 70657860 1609 + protein coding gene predicted gene 10642
Cpgi22003 9 70656318 to 70657727 1409 CpG island CpG island 22003
Tssr90420 9 70657121 to 70657188 67 - TSS region transcription start site region 90420
Gm31872 9 70657230 to 70668759 11529 + lncRNA gene predicted gene, 31872
Tssr90421 9 70657235 to 70657248 13 - TSS region transcription start site region 90421
Tssr85926 9 70658158 to 70658160 2 + TSS region transcription start site region 85926
Tssr85927 9 70658532 to 70658537 5 + TSS region transcription start site region 85927
Cpgi22004 9 70678602 to 70679999 1397 CpG island CpG island 22004
Tssr85928 9 70678950 to 70679010 60 + TSS region transcription start site region 85928
Adam10 9 70678997 to 70780229 101232 + protein coding gene a disintegrin and metallopeptidase domain 10
Tssr85929 9 70679021 to 70679116 95 + TSS region transcription start site region 85929
Tssr85930 9 70679129 to 70679140 11 + TSS region transcription start site region 85930
Tssr90422 9 70692013 to 70692040 27 - TSS region transcription start site region 90422
Tssr85931 9 70710039 to 70710040 1 + TSS region transcription start site region 85931
Cycs-ps1 9 70711380 to 70712249 869 + pseudogene cytochrome c, pseudogene 1
Tssr85932 9 70729910 to 70729912 2 + TSS region transcription start site region 85932
Tssr85933 9 70748192 to 70748206 14 + TSS region transcription start site region 85933
Tssr85934 9 70754168 to 70754180 12 + TSS region transcription start site region 85934
Tssr2925 9 70768713 to 70768721 8 + TSS region transcription start site region 2925
Tssr85935 9 70768803 to 70768817 14 + TSS region transcription start site region 85935
Tssr85936 9 70779118 to 70779144 26 + TSS region transcription start site region 85936
Tssr85937 9 70779538 to 70779560 22 + TSS region transcription start site region 85937
Lipc 9 70798128 to 70952221 154093 - protein coding gene lipase, hepatic
Gm25149 9 70799556 to 70799637 81 - miRNA gene predicted gene, 25149
Tssr90423 9 70816979 to 70816994 15 - TSS region transcription start site region 90423
Tssr85938 9 70835118 to 70835126 8 + TSS region transcription start site region 85938
Tssr90424 9 70835180 to 70835184 4 - TSS region transcription start site region 90424