Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:70293233-70533274

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myo1e 9 70207350 to 70399766 192416 + protein coding gene myosin IE
Gm40531 9 70287068 to 70298583 11515 - lncRNA gene predicted gene, 40531
Tssr85893 9 70298283 to 70298292 9 + TSS region transcription start site region 85893
4833444G19Rik 9 70311093 to 70314323 3230 unclassified non-coding RNA gene RIKEN cDNA 4833444G19 gene
Tssr85894 9 70314209 to 70314258 49 + TSS region transcription start site region 85894
Tssr85895 9 70317183 to 70317204 21 + TSS region transcription start site region 85895
Tssr85896 9 70321385 to 70321394 9 + TSS region transcription start site region 85896
Tssr85897 9 70321607 to 70321651 44 + TSS region transcription start site region 85897
Tssr85898 9 70342042 to 70342055 13 + TSS region transcription start site region 85898
Gm18017 9 70343871 to 70344633 762 + pseudogene predicted gene, 18017
Tssr85899 9 70370406 to 70370418 12 + TSS region transcription start site region 85899
Tssr2924 9 70389751 to 70389753 2 + TSS region transcription start site region 2924
Tssr85900 9 70398852 to 70398871 19 + TSS region transcription start site region 85900
Tssr85901 9 70399323 to 70399349 26 + TSS region transcription start site region 85901
Tssr85902 9 70399355 to 70399394 39 + TSS region transcription start site region 85902
Tssr85903 9 70399420 to 70399431 11 + TSS region transcription start site region 85903
Mir5626 9 70405694 to 70405753 59 - miRNA gene microRNA 5626
Ccnb2 9 70407692 to 70421547 13855 - protein coding gene cyclin B2
Tssr90405 9 70413233 to 70413274 41 - TSS region transcription start site region 90405
Cpgi22000 9 70421166 to 70421713 547 CpG island CpG island 22000
Tssr90406 9 70421491 to 70421529 38 - TSS region transcription start site region 90406
Tssr90407 9 70421533 to 70421592 59 - TSS region transcription start site region 90407
Rnf111 9 70425424 to 70503725 78301 - protein coding gene ring finger 111
Tssr90408 9 70455669 to 70455673 4 - TSS region transcription start site region 90408
Tssr90409 9 70457883 to 70457899 16 - TSS region transcription start site region 90409
Gm24615 9 70475484 to 70475596 112 + snoRNA gene predicted gene, 24615
Tssr90410 9 70484802 to 70484811 9 - TSS region transcription start site region 90410
Tssr90411 9 70488117 to 70488120 3 - TSS region transcription start site region 90411
Cpgi22001 9 70502962 to 70504029 1067 CpG island CpG island 22001
Tssr90412 9 70503329 to 70503378 49 - TSS region transcription start site region 90412
Tssr90413 9 70503718 to 70503805 87 - TSS region transcription start site region 90413
Tssr85904 9 70512207 to 70512220 13 + TSS region transcription start site region 85904
Tssr85905 9 70512224 to 70512244 20 + TSS region transcription start site region 85905
Gm23588 9 70517200 to 70517298 98 + snRNA gene predicted gene, 23588
Gm23730 9 70521598 to 70521704 106 - snRNA gene predicted gene, 23730
Tssr85906 9 70526880 to 70526892 12 + TSS region transcription start site region 85906