Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:70041484-70241559

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr85876 9 70067918 to 70067933 15 + TSS region transcription start site region 85876
Tssr85877 9 70067946 to 70067955 9 + TSS region transcription start site region 85877
Gm47233 9 70069867 to 70072034 2167 + unclassified gene predicted gene, 47233
2210414F02Rik 9 70072923 to 70073443 520 + lincRNA gene RIKEN cDNA 2210414F02 gene
Gm39369 9 70079791 to 70083046 3255 - lncRNA gene predicted gene, 39369
Fam81a 9 70088511 to 70142555 54044 - protein coding gene family with sequence similarity 81, member A
Tssr90396 9 70090252 to 70090258 6 - TSS region transcription start site region 90396
Tssr90397 9 70103075 to 70103110 35 - TSS region transcription start site region 90397
Tssr90398 9 70103117 to 70103142 25 - TSS region transcription start site region 90398
Cpgi21998 9 70140918 to 70142094 1176 CpG island CpG island 21998
Tssr90399 9 70141356 to 70141482 126 - TSS region transcription start site region 90399
Tssr90400 9 70141484 to 70141559 75 - TSS region transcription start site region 90400
Tssr90401 9 70142172 to 70142183 11 - TSS region transcription start site region 90401
Gm24257 9 70148806 to 70148936 130 - snoRNA gene predicted gene, 24257
Gm39476 9 70149687 to 70160267 10580 - lncRNA gene predicted gene, 39476
Gm26849 9 70169986 to 70197548 27562 - lincRNA gene predicted gene, 26849
Tssr90402 9 70197470 to 70197478 8 - TSS region transcription start site region 90402
Cpgi21999 9 70207022 to 70208412 1390 CpG island CpG island 21999
Tssr85878 9 70207342 to 70207356 14 + TSS region transcription start site region 85878
Myo1e 9 70207350 to 70399766 192416 + protein coding gene myosin IE
Tssr85879 9 70207375 to 70207387 12 + TSS region transcription start site region 85879
Tssr85880 9 70207398 to 70207414 16 + TSS region transcription start site region 85880
Tssr90403 9 70211721 to 70211744 23 - TSS region transcription start site region 90403
Tssr85881 9 70213211 to 70213214 3 + TSS region transcription start site region 85881
Tssr90404 9 70217369 to 70217409 40 - TSS region transcription start site region 90404
Tssr85882 9 70220715 to 70220736 21 + TSS region transcription start site region 85882
Tssr85883 9 70220746 to 70220766 20 + TSS region transcription start site region 85883
Tssr85884 9 70221035 to 70221044 9 + TSS region transcription start site region 85884
Tssr85885 9 70221074 to 70221088 14 + TSS region transcription start site region 85885
Tssr85886 9 70235162 to 70235206 44 + TSS region transcription start site region 85886
Tssr85887 9 70235869 to 70235901 32 + TSS region transcription start site region 85887
Tssr85888 9 70240367 to 70240385 18 + TSS region transcription start site region 85888