Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:68540575-68740623

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hrtiq1	9	52514798 to 68648726	16133928		QTL	heart rate time index, QTL 1
Lfhrvq1	9	58877035 to 68648726	9771691		QTL	low frequency time index heart rate varaiblity, QTL 1
Gm47169	9	68552395 to 68552556	161	+	pseudogene	predicted gene, 47169
Gm31141	9	68556289 to 68562301	6012	-	lncRNA gene	predicted gene, 31141
Tssr90358	9	68558606 to 68558607	1	-	TSS region	transcription start site region 90358
Tssr90359	9	68569252 to 68569257	5	-	TSS region	transcription start site region 90359
Tssr85819	9	68640575 to 68640623	48	+	TSS region	transcription start site region 85819
Gm31325	9	68653067 to 68653791	724	-	lncRNA gene	predicted gene, 31325
Cpgi21985	9	68653116 to 68655031	1915		CpG island	CpG island 21985
Tssr85820	9	68653626 to 68653639	13	+	TSS region	transcription start site region 85820
Tssr85821	9	68653715 to 68653731	16	+	TSS region	transcription start site region 85821
Tssr85822	9	68653742 to 68653757	15	+	TSS region	transcription start site region 85822
Tssr85823	9	68653761 to 68653785	24	+	TSS region	transcription start site region 85823
Rora	9	68653786 to 69388246	734460	+	protein coding gene	RAR-related orphan receptor alpha
Cpgi21986	9	68655514 to 68655710	196		CpG island	CpG island 21986
D9Mit165	9	68681869 to 68681990	121		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 165
Tssr85824	9	68717736 to 68717741	5	+	TSS region	transcription start site region 85824
Tssr85825	9	68728268 to 68728269	1	+	TSS region	transcription start site region 85825
Tssr85826	9	68737021 to 68737026	5	+	TSS region	transcription start site region 85826