Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:66948339-67139219

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rps27l 9 66946086 to 66949516 3430 + protein coding gene ribosomal protein S27-like
Lactb 9 66955388 to 66975484 20096 - protein coding gene lactamase, beta
Cpgi21976 9 66974816 to 66975551 735 CpG island CpG island 21976
Tssr85779 9 66974989 to 66975003 14 + TSS region transcription start site region 85779
Tssr90297 9 66975387 to 66975459 72 - TSS region transcription start site region 90297
Tssr85780 9 66978318 to 66978342 24 + TSS region transcription start site region 85780
Gm24225 9 66981088 to 66981185 97 - snRNA gene predicted gene, 24225
Tssr85781 9 67011922 to 67011925 3 + TSS region transcription start site region 85781
Gm30639 9 67012742 to 67022505 9763 + lncRNA gene predicted gene, 30639
Tssr85782 9 67013062 to 67013074 12 + TSS region transcription start site region 85782
Tssr85783 9 67013081 to 67013092 11 + TSS region transcription start site region 85783
Tssr2921 9 67020651 to 67020654 3 + TSS region transcription start site region 2921
Tpm1 9 67022590 to 67049401 26811 - protein coding gene tropomyosin 1, alpha
Tssr90298 9 67022643 to 67022660 17 - TSS region transcription start site region 90298
Tssr90299 9 67023246 to 67023261 15 - TSS region transcription start site region 90299
Tssr90300 9 67023314 to 67023345 31 - TSS region transcription start site region 90300
Tssr90301 9 67026656 to 67026669 13 - TSS region transcription start site region 90301
Tssr90302 9 67026823 to 67026827 4 - TSS region transcription start site region 90302
Tssr90303 9 67031077 to 67031102 25 - TSS region transcription start site region 90303
Tssr85784 9 67031448 to 67031482 34 + TSS region transcription start site region 85784
Tssr90304 9 67031474 to 67031527 53 - TSS region transcription start site region 90304
Tssr90305 9 67032528 to 67032550 22 - TSS region transcription start site region 90305
Tssr85785 9 67032796 to 67032837 41 + TSS region transcription start site region 85785
Tssr90306 9 67032842 to 67032871 29 - TSS region transcription start site region 90306
Tssr90307 9 67033377 to 67033382 5 - TSS region transcription start site region 90307
Tssr85786 9 67033866 to 67033886 20 + TSS region transcription start site region 85786
Tssr85787 9 67033898 to 67033904 6 + TSS region transcription start site region 85787
Tssr90308 9 67033903 to 67033960 57 - TSS region transcription start site region 90308
Tssr85788 9 67033907 to 67033961 54 + TSS region transcription start site region 85788
Tssr90309 9 67033974 to 67034001 27 - TSS region transcription start site region 90309
Tssr85789 9 67035985 to 67036005 20 + TSS region transcription start site region 85789
Tssr90310 9 67036042 to 67036086 44 - TSS region transcription start site region 90310
Tssr90311 9 67036105 to 67036137 32 - TSS region transcription start site region 90311
Tssr85790 9 67041132 to 67041142 10 + TSS region transcription start site region 85790
Tssr85791 9 67041145 to 67041157 12 + TSS region transcription start site region 85791
Tssr85792 9 67041728 to 67041731 3 + TSS region transcription start site region 85792
Cpgi21977 9 67043339 to 67044219 880 CpG island CpG island 21977
Tssr90312 9 67043718 to 67043742 24 - TSS region transcription start site region 90312
Tssr90313 9 67043743 to 67043820 77 - TSS region transcription start site region 90313
Tssr90314 9 67043824 to 67043829 5 - TSS region transcription start site region 90314
Tssr90315 9 67043832 to 67043843 11 - TSS region transcription start site region 90315
Tssr90316 9 67043844 to 67043862 18 - TSS region transcription start site region 90316
Tssr90317 9 67043869 to 67043945 76 - TSS region transcription start site region 90317
Tssr90318 9 67043953 to 67043960 7 - TSS region transcription start site region 90318
Tssr90319 9 67043970 to 67043983 13 - TSS region transcription start site region 90319
Tssr90320 9 67044950 to 67044954 4 - TSS region transcription start site region 90320
Tssr90321 9 67046108 to 67046121 13 - TSS region transcription start site region 90321
Cpgi21978 9 67047723 to 67049791 2068 CpG island CpG island 21978
Tssr85793 9 67047794 to 67047808 14 + TSS region transcription start site region 85793
Tssr85794 9 67047824 to 67047840 16 + TSS region transcription start site region 85794
Tssr90322 9 67047828 to 67047923 95 - TSS region transcription start site region 90322
Tssr90323 9 67048153 to 67048168 15 - TSS region transcription start site region 90323
Tssr90324 9 67049200 to 67049220 20 - TSS region transcription start site region 90324
Tssr90325 9 67049646 to 67049662 16 - TSS region transcription start site region 90325
Gm10646 9 67102300 to 67109601 7301 + lincRNA gene predicted gene 10646
Gm22145 9 67104208 to 67104355 147 + snRNA gene predicted gene, 22145
Gm19299 9 67133561 to 67163788 30227 + lincRNA gene predicted gene, 19299