Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ntta3 | 9 | 19237522 | QTL | neurotensin transcript abundance 3 | ||
Vmbic5 | 9 | 8239686 | QTL | ventral midbrain iron content 5 | ||
Trip4 | 9 | 79864 | - | protein coding gene | thyroid hormone receptor interactor 4 | |
Gm30314 | 9 | 9082 | + | lncRNA gene | predicted gene, 30314 | |
n-R5s85 | 9 | 112 | + | rRNA gene | nuclear encoded rRNA 5S 85 | |
Gm16073 | 9 | 516 | + | pseudogene | predicted gene 16073 | |
Cpgi21958 | 9 | 429 | CpG island | CpG island 21958 | ||
Tssr90222 | 9 | 45 | - | TSS region | transcription start site region 90222 | |
Tssr90223 | 9 | 15 | - | TSS region | transcription start site region 90223 | |
Tssr90224 | 9 | 11 | - | TSS region | transcription start site region 90224 | |
Cpgi21959 | 9 | 181 | CpG island | CpG island 21959 | ||
Pclaf | 9 | 13029 | + | protein coding gene | PCNA clamp associated factor | |
Tssr85728 | 9 | 52 | + | TSS region | transcription start site region 85728 | |
Tssr85729 | 9 | 14 | + | TSS region | transcription start site region 85729 | |
Tssr85730 | 9 | 14 | + | TSS region | transcription start site region 85730 | |
D030028M11Rik | 9 | 2341 | unclassified gene | RIKEN cDNA D030028M11 gene | ||
Tssr85731 | 9 | 35 | + | TSS region | transcription start site region 85731 | |
Gm23248 | 9 | 107 | + | snRNA gene | predicted gene, 23248 | |
Tssr85732 | 9 | 5 | + | TSS region | transcription start site region 85732 | |
Cpgi21960 | 9 | 1048 | CpG island | CpG island 21960 | ||
Tssr90225 | 9 | 19 | - | TSS region | transcription start site region 90225 | |
Tssr90226 | 9 | 33 | - | TSS region | transcription start site region 90226 | |
Csnk1g1 | 9 | 136053 | + | protein coding gene | casein kinase 1, gamma 1 | |
Tssr85733 | 9 | 52 | + | TSS region | transcription start site region 85733 | |
Tssr85734 | 9 | 60 | + | TSS region | transcription start site region 85734 | |
Tssr85735 | 9 | 11 | + | TSS region | transcription start site region 85735 | |
Tssr85736 | 9 | 1 | + | TSS region | transcription start site region 85736 | |
Pgia5 | 9 | 121 | QTL | proteoglycan induced arthritis 5 | ||
D9Mit104 | 9 | 121 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 104 | ||
Cd4ts4 | 9 | 121 | QTL | CD4 T cell subset 4 | ||
Smgd1 | 9 | 20772140 | QTL | submucosal gland distribution 1 | ||
Tssr85737 | 9 | 20 | + | TSS region | transcription start site region 85737 | |
Tssr85738 | 9 | 9 | + | TSS region | transcription start site region 85738 | |
Gm22657 | 9 | 131 | - | snoRNA gene | predicted gene, 22657 | |
Tssr85739 | 9 | 3 | + | TSS region | transcription start site region 85739 | |
D9Dcr3 | 9 | 104 | DNA segment | DNA segment, Chr 9, Derry C. Roopenian 3 | ||
Tssr85740 | 9 | 34 | + | TSS region | transcription start site region 85740 | |
Tssr85741 | 9 | 4 | + | TSS region | transcription start site region 85741 | |
Tssr85742 | 9 | 27 | + | TSS region | transcription start site region 85742 | |
Cpgi21961 | 9 | 921 | CpG island | CpG island 21961 | ||
Tssr90227 | 9 | 31 | - | TSS region | transcription start site region 90227 | |
Tssr85743 | 9 | 11 | + | TSS region | transcription start site region 85743 | |
Tssr2919 | 9 | 11 | + | TSS region | transcription start site region 2919 | |
Tssr2920 | 9 | 7 | + | TSS region | transcription start site region 2920 | |
Tssr85744 | 9 | 78 | + | TSS region | transcription start site region 85744 | |
Ppib | 9 | 6401 | + | protein coding gene | peptidylprolyl isomerase B | |
Tssr85745 | 9 | 20 | + | TSS region | transcription start site region 85745 | |
Snx22 | 9 | 4543 | - | protein coding gene | sorting nexin 22 | |
Cpgi21962 | 9 | 1016 | CpG island | CpG island 21962 | ||
Tssr90228 | 9 | 39 | - | TSS region | transcription start site region 90228 | |
Tssr90229 | 9 | 29 | - | TSS region | transcription start site region 90229 | |
Snx1 | 9 | 36759 | - | protein coding gene | sorting nexin 1 | |
Tssr90230 | 9 | 10 | - | TSS region | transcription start site region 90230 | |
Tssr90231 | 9 | 10 | - | TSS region | transcription start site region 90231 | |
Tssr90232 | 9 | 4 | - | TSS region | transcription start site region 90232 | |
Cpgi21963 | 9 | 582 | CpG island | CpG island 21963 | ||
Tssr90233 | 9 | 11 | - | TSS region | transcription start site region 90233 | |
Tssr90234 | 9 | 44 | - | TSS region | transcription start site region 90234 | |
Tssr90235 | 9 | 22 | - | TSS region | transcription start site region 90235 | |
Tssr90236 | 9 | 20 | - | TSS region | transcription start site region 90236 | |
Tssr90237 | 9 | 11 | - | TSS region | transcription start site region 90237 | |
Tssr90238 | 9 | 14 | - | TSS region | transcription start site region 90238 | |
Cpgi21964 | 9 | 368 | CpG island | CpG island 21964 | ||
Tssr90239 | 9 | 44 | - | TSS region | transcription start site region 90239 | |
Ciao2a | 9 | 12344 | + | protein coding gene | cytosolic iron-sulfur assembly component 2A | |
Tssr85746 | 9 | 12 | + | TSS region | transcription start site region 85746 | |
Tssr85747 | 9 | 67 | + | TSS region | transcription start site region 85747 | |
Tssr85748 | 9 | 17 | + | TSS region | transcription start site region 85748 | |
Tssr85749 | 9 | 28 | + | TSS region | transcription start site region 85749 | |
Tssr85750 | 9 | 34 | + | TSS region | transcription start site region 85750 | |
Tssr85751 | 9 | 6 | + | TSS region | transcription start site region 85751 | |
Cpgi21965 | 9 | 929 | CpG island | CpG island 21965 | ||
Tssr85752 | 9 | 65 | + | TSS region | transcription start site region 85752 | |
Dapk2 | 9 | 114016 | + | protein coding gene | death-associated protein kinase 2 | |
D9Mit233 | 9 | 147 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 233 | ||
D9Mit233.1 | 9 | 121 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 233.1 | ||
Tssr85753 | 9 | 5 | + | TSS region | transcription start site region 85753 | |
Cpgi21966 | 9 | 413 | CpG island | CpG island 21966 | ||
Gm19247 | 9 | 325 | + | pseudogene | predicted gene, 19247 | |
Gm39364 | 9 | 1464 | - | lncRNA gene | predicted gene, 39364 | |
Tssr90240 | 9 | 8 | - | TSS region | transcription start site region 90240 | |
Cpgi21967 | 9 | 1522 | CpG island | CpG island 21967 | ||
Tssr85754 | 9 | 19 | + | TSS region | transcription start site region 85754 | |
Gm30447 | 9 | 897 | - | protein coding gene | predicted gene, 30447 | |
Tssr85755 | 9 | 19 | + | TSS region | transcription start site region 85755 | |
Tssr85756 | 9 | 9 | + | TSS region | transcription start site region 85756 | |
Herc1 | 9 | 158325 | + | protein coding gene | HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 | |
Tssr85757 | 9 | 50 | + | TSS region | transcription start site region 85757 | |
Tssr85758 | 9 | 7 | + | TSS region | transcription start site region 85758 | |
Gm23428 | 9 | 101 | - | snRNA gene | predicted gene, 23428 | |
Tssr85759 | 9 | 4 | + | TSS region | transcription start site region 85759 | |
Tssr85760 | 9 | 6 | + | TSS region | transcription start site region 85760 | |
Gm28379 | 9 | 30750 | - | antisense lncRNA gene | predicted gene 28379 | |
Tssr85761 | 9 | 31 | + | TSS region | transcription start site region 85761 | |
Tssr85762 | 9 | 12 | + | TSS region | transcription start site region 85762 | |
Tssr85763 | 9 | 23 | + | TSS region | transcription start site region 85763 | |
Tssr85764 | 9 | 4 | + | TSS region | transcription start site region 85764 | |
Fbxl22 | 9 | 6134 | - | protein coding gene | F-box and leucine-rich repeat protein 22 | |
Cpgi21968 | 9 | 1499 | CpG island | CpG island 21968 | ||
Tssr90241 | 9 | 49 | - | TSS region | transcription start site region 90241 | |
Tssr90242 | 9 | 35 | - | TSS region | transcription start site region 90242 | |
Tssr85765 | 9 | 27 | + | TSS region | transcription start site region 85765 | |
Tssr90243 | 9 | 26 | - | TSS region | transcription start site region 90243 | |
Tssr90244 | 9 | 3 | - | TSS region | transcription start site region 90244 | |
Tssr90245 | 9 | 23 | - | TSS region | transcription start site region 90245 | |
Tssr90246 | 9 | 30 | - | TSS region | transcription start site region 90246 | |
Usp3 | 9 | 78476 | - | protein coding gene | ubiquitin specific peptidase 3 | |
Tssr90247 | 9 | 4 | - | TSS region | transcription start site region 90247 | |
Tssr90248 | 9 | 9 | - | TSS region | transcription start site region 90248 | |
Tssr90249 | 9 | 32 | - | TSS region | transcription start site region 90249 | |
Tssr90250 | 9 | 31 | - | TSS region | transcription start site region 90250 | |
Gm15563 | 9 | 10058 | + | antisense lncRNA gene | predicted gene 15563 | |
Tssr90251 | 9 | 20 | - | TSS region | transcription start site region 90251 | |
Tssr90252 | 9 | 6 | - | TSS region | transcription start site region 90252 | |
Tssr90253 | 9 | 8 | - | TSS region | transcription start site region 90253 | |
Tssr90254 | 9 | 2 | - | TSS region | transcription start site region 90254 | |
Tssr90255 | 9 | 3 | - | TSS region | transcription start site region 90255 | |
Cpgi21969 | 9 | 1722 | CpG island | CpG island 21969 | ||
Tssr90256 | 9 | 9 | - | TSS region | transcription start site region 90256 | |
Tssr90257 | 9 | 24 | - | TSS region | transcription start site region 90257 | |
Tssr90258 | 9 | 13 | - | TSS region | transcription start site region 90258 | |
Tssr90259 | 9 | 31 | - | TSS region | transcription start site region 90259 | |
Tssr90260 | 9 | 12 | - | TSS region | transcription start site region 90260 | |
Tssr90261 | 9 | 9 | - | TSS region | transcription start site region 90261 | |
Tssr90262 | 9 | 20 | - | TSS region | transcription start site region 90262 | |
Tssr90263 | 9 | 14 | - | TSS region | transcription start site region 90263 | |
Tssr90264 | 9 | 9 | - | TSS region | transcription start site region 90264 | |
Tssr85766 | 9 | 11 | + | TSS region | transcription start site region 85766 | |
Tssr85767 | 9 | 45 | + | TSS region | transcription start site region 85767 | |
D9Dcr4 | 9 | 102 | DNA segment | DNA segment, Chr 9, Derry C. Roopenian 4 | ||
Cpgi21970 | 9 | 270 | CpG island | CpG island 21970 | ||
Car12 | 9 | 53159 | + | protein coding gene | carbonic anhydrase 12 | |
Tssr85768 | 9 | 7 | + | TSS region | transcription start site region 85768 | |
Tssr85769 | 9 | 17 | + | TSS region | transcription start site region 85769 | |
D9Mit303 | 9 | 123 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology 303 | ||
Tssr85770 | 9 | 6 | + | TSS region | transcription start site region 85770 | |
Aph1b | 9 | 20288 | - | protein coding gene | aph1 homolog B, gamma secretase subunit | |
Tssr90265 | 9 | 4 | - | TSS region | transcription start site region 90265 | |
Cpgi21971 | 9 | 1049 | CpG island | CpG island 21971 | ||
Tssr90266 | 9 | 21 | - | TSS region | transcription start site region 90266 | |
Tssr90267 | 9 | 80 | - | TSS region | transcription start site region 90267 | |
Tssr90268 | 9 | 52 | - | TSS region | transcription start site region 90268 | |
Gm10647 | 9 | 2035 | + | protein coding gene | predicted gene 10647 | |
BC050972 | 9 | 5681 | - | antisense lncRNA gene | cDNA sequence BC050972 | |
Tssr90269 | 9 | 15 | - | TSS region | transcription start site region 90269 | |
Tssr90270 | 9 | 15 | - | TSS region | transcription start site region 90270 | |
Ppp1r2-ps4 | 9 | 632 | - | pseudogene | protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 4 | |
Cpgi21972 | 9 | 233 | CpG island | CpG island 21972 | ||
Aph1c | 9 | 19732 | - | protein coding gene | aph1 homolog C, gamma secretase subunit | |
Cpgi21973 | 9 | 1319 | CpG island | CpG island 21973 | ||
Tssr90271 | 9 | 12 | - | TSS region | transcription start site region 90271 | |
Tssr90272 | 9 | 18 | - | TSS region | transcription start site region 90272 | |
Gm17098 | 9 | 835 | + | antisense lncRNA gene | predicted gene 17098 | |
Tssr90273 | 9 | 3 | - | TSS region | transcription start site region 90273 | |
Tssr90274 | 9 | 8 | - | TSS region | transcription start site region 90274 | |
Rab8b | 9 | 76023 | - | protein coding gene | RAB8B, member RAS oncogene family | |
Tssr90275 | 9 | 11 | - | TSS region | transcription start site region 90275 | |
Tssr90276 | 9 | 9 | - | TSS region | transcription start site region 90276 | |
Tssr90277 | 9 | 14 | - | TSS region | transcription start site region 90277 | |
Tssr90278 | 9 | 15 | - | TSS region | transcription start site region 90278 | |
Tssr90279 | 9 | 20 | - | TSS region | transcription start site region 90279 | |
Tssr90280 | 9 | 14 | - | TSS region | transcription start site region 90280 | |
Tssr90281 | 9 | 89 | - | TSS region | transcription start site region 90281 | |
Tssr90282 | 9 | 41 | - | TSS region | transcription start site region 90282 | |
Tssr90283 | 9 | 22 | - | TSS region | transcription start site region 90283 | |
Tssr90284 | 9 | 23 | - | TSS region | transcription start site region 90284 | |
Tssr90285 | 9 | 26 | - | TSS region | transcription start site region 90285 | |
Tssr90286 | 9 | 18 | - | TSS region | transcription start site region 90286 | |
Tssr90287 | 9 | 15 | - | TSS region | transcription start site region 90287 |