Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:65567160-65615967

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Plekho2	9	65552698 to 65580040	27342	-	protein coding gene	pleckstrin homology domain containing, family O member 2
Tssr90208	9	65567703 to 65567734	31	-	TSS region	transcription start site region 90208
Tssr90209	9	65571791 to 65571823	32	-	TSS region	transcription start site region 90209
Tssr90210	9	65573007 to 65573054	47	-	TSS region	transcription start site region 90210
Tssr90211	9	65574689 to 65574705	16	-	TSS region	transcription start site region 90211
D9Dcr2	9	65577857 to 65577972	115		DNA segment	DNA segment, Chr 9, Derry C. Roopenian 2
D9Mit336	9	65577864 to 65577985	121		DNA segment	DNA Segment, Chr 9 Massachusetts Institute of Technology 336
Tssr85713	9	65579220 to 65579231	11	+	TSS region	transcription start site region 85713
Cpgi21951	9	65579476 to 65580414	938		CpG island	CpG island 21951
Tssr90212	9	65580043 to 65580061	18	-	TSS region	transcription start site region 90212
Tssr90213	9	65580081 to 65580086	5	-	TSS region	transcription start site region 90213
Cpgi21952	9	65580496 to 65580762	266		CpG island	CpG island 21952
Cpgi21953	9	65586866 to 65587073	207		CpG island	CpG island 21953
Tssr85714	9	65587149 to 65587185	36	+	TSS region	transcription start site region 85714
Pif1	9	65587160 to 65595967	8807	+	protein coding gene	PIF1 5'-to-3' DNA helicase
Tssr85715	9	65587187 to 65587221	34	+	TSS region	transcription start site region 85715
Cpgi21954	9	65587613 to 65588502	889		CpG island	CpG island 21954
Gm10144	9	65599914 to 65600981	1067	-	pseudogene	predicted pseudogene 10144