Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:65400683-65521454

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rasl12 9 65398506 to 65414853 16347 + protein coding gene RAS-like, family 12
Tssr85697 9 65400868 to 65400879 11 + TSS region transcription start site region 85697
Tssr85698 9 65400897 to 65400912 15 + TSS region transcription start site region 85698
Slc51b 9 65412753 to 65422773 10020 - protein coding gene solute carrier family 51, beta subunit
Tssr85699 9 65412771 to 65412796 25 + TSS region transcription start site region 85699
Tssr85700 9 65412917 to 65412934 17 + TSS region transcription start site region 85700
D9Mit360 9 65415984 to 65416114 130 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-360
Tssr90174 9 65422776 to 65422777 1 - TSS region transcription start site region 90174
Tssr90175 9 65422780 to 65422791 11 - TSS region transcription start site region 90175
Tssr90176 9 65422834 to 65422848 14 - TSS region transcription start site region 90176
Tssr90177 9 65422858 to 65422873 15 - TSS region transcription start site region 90177
Tssr90178 9 65422895 to 65422910 15 - TSS region transcription start site region 90178
Tssr90179 9 65422949 to 65422961 12 - TSS region transcription start site region 90179
Tssr90180 9 65422983 to 65422994 11 - TSS region transcription start site region 90180
Tssr90181 9 65423011 to 65423022 11 - TSS region transcription start site region 90181
Tssr90182 9 65423028 to 65423042 14 - TSS region transcription start site region 90182
Tssr90183 9 65423092 to 65423105 13 - TSS region transcription start site region 90183
Tssr90184 9 65423244 to 65423256 12 - TSS region transcription start site region 90184
Cpgi21948 9 65435594 to 65436258 664 CpG island CpG island 21948
Tssr85701 9 65435766 to 65435793 27 + TSS region transcription start site region 85701
Mtfmt 9 65435782 to 65453054 17272 + protein coding gene mitochondrial methionyl-tRNA formyltransferase
Tssr85702 9 65435797 to 65435845 48 + TSS region transcription start site region 85702
D9Mit362 9 65445717 to 65445824 107 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-362
Gm47270 9 65453615 to 65460399 6784 + lincRNA gene predicted gene, 47270
Cpgi21949 9 65460683 to 65461454 771 CpG island CpG island 21949
Tssr2916 9 65460912 to 65460917 5 + TSS region transcription start site region 2916
Tssr85703 9 65460926 to 65460983 57 + TSS region transcription start site region 85703
Spg21 9 65460947 to 65488470 27523 + protein coding gene SPG21, maspardin
Tssr85704 9 65460984 to 65460993 9 + TSS region transcription start site region 85704
Tssr85705 9 65461321 to 65461351 30 + TSS region transcription start site region 85705
Tssr85706 9 65462538 to 65462542 4 + TSS region transcription start site region 85706
Tssr85707 9 65462665 to 65462672 7 + TSS region transcription start site region 85707
Tssr85708 9 65462795 to 65462840 45 + TSS region transcription start site region 85708
Milac3 9 65465164 to 65465164 0 QTL methamphetamine induced locomotor activation 3
Ankdd1a 9 65488470 to 65520193 31723 - protein coding gene ankyrin repeat and death domain containing 1A
Tssr90185 9 65499911 to 65499915 4 - TSS region transcription start site region 90185
Tssr90186 9 65512706 to 65512719 13 - TSS region transcription start site region 90186
Cpgi21950 9 65520191 to 65520435 244 CpG island CpG island 21950
Gm17749 9 65521106 to 65529806 8700 - unclassified non-coding RNA gene predicted gene, 17749