Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:64057155-64177191

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21921 9 64060171 to 64060676 505 CpG island CpG island 21921
Scarletltr 9 64080761 to 64086961 6200 + lncRNA gene Scarletltr, erythroid developmental long intergenic non-protein coding transcript
Cpgi21922 9 64084675 to 64085266 591 CpG island CpG island 21922
Tssr85588 9 64084907 to 64084918 11 + TSS region transcription start site region 85588
Tssr85589 9 64084919 to 64084936 17 + TSS region transcription start site region 85589
Gm39360 9 64088485 to 64100555 12070 - lncRNA gene predicted gene, 39360
Tssr85590 9 64092335 to 64092343 8 + TSS region transcription start site region 85590
Lctl 9 64117147 to 64138118 20971 + protein coding gene lactase-like
Tssr85591 9 64117155 to 64117191 36 + TSS region transcription start site region 85591
Tssr85592 9 64117225 to 64117242 17 + TSS region transcription start site region 85592
Tssr85593 9 64117254 to 64117267 13 + TSS region transcription start site region 85593
Tssr85594 9 64121501 to 64121504 3 + TSS region transcription start site region 85594
D9Mit209 9 64127276 to 64127401 125 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 209
Zwilch 9 64137144 to 64172931 35787 - protein coding gene zwilch kinetochore protein
Tssr85595 9 64139273 to 64139277 4 + TSS region transcription start site region 85595
Tssr90130 9 64158047 to 64158049 2 - TSS region transcription start site region 90130
Cpgi21923 9 64172411 to 64173083 672 CpG island CpG island 21923
Tssr90131 9 64172889 to 64172918 29 - TSS region transcription start site region 90131
Tssr85596 9 64173364 to 64173388 24 + TSS region transcription start site region 85596
Rpl4 9 64173387 to 64178562 5175 + protein coding gene ribosomal protein L4
Tssr2907 9 64173398 to 64173399 1 + TSS region transcription start site region 2907
Tssr85597 9 64174912 to 64174972 60 + TSS region transcription start site region 85597
Gm23344 9 64175048 to 64175115 67 + snoRNA gene predicted gene, 23344
Tssr85598 9 64175422 to 64175426 4 + TSS region transcription start site region 85598
Snord16a 9 64175432 to 64175522 90 + snoRNA gene small nucleolar RNA, C/D box 16A
Tssr85599 9 64175588 to 64175613 25 + TSS region transcription start site region 85599
Gm22571 9 64175873 to 64175942 69 + snoRNA gene predicted gene, 22571
Gm23136 9 64176661 to 64176759 98 + snoRNA gene predicted gene, 23136
Tssr85600 9 64176969 to 64177018 49 + TSS region transcription start site region 85600
Gm22455 9 64177123 to 64177193 70 + snoRNA gene predicted gene, 22455