Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:63473876-63733974

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm16759 9 63399376 to 63480667 81291 + lncRNA gene predicted gene, 16759
Iqch 9 63421455 to 63602493 181038 - protein coding gene IQ motif containing H
Gm35809 9 63480686 to 63534004 53318 + lncRNA gene predicted gene, 35809
D9Mit338 9 63487095 to 63487219 124 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 338
Tssr2906 9 63500725 to 63500729 4 + TSS region transcription start site region 2906
Gm39358 9 63565519 to 63571734 6215 + lncRNA gene predicted gene, 39358
Cpgi21916 9 63602051 to 63603129 1078 CpG island CpG island 21916
Tssr90098 9 63602449 to 63602460 11 - TSS region transcription start site region 90098
Tssr90099 9 63602464 to 63602494 30 - TSS region transcription start site region 90099
Tssr90100 9 63602496 to 63602505 9 - TSS region transcription start site region 90100
Aagab 9 63602628 to 63641897 39269 + protein coding gene alpha- and gamma-adaptin binding protein
Tssr85581 9 63602650 to 63602703 53 + TSS region transcription start site region 85581
D9Dcr1 9 63603875 to 63603970 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 1
D9Mit106 9 63603876 to 63603974 98 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 106
avc3 9 63603876 to 68829021 5225145 heritable phenotypic marker atrioventricular canal 3
Smad3 9 63646767 to 63757994 111227 - protein coding gene SMAD family member 3
Tssr90101 9 63666789 to 63666796 7 - TSS region transcription start site region 90101
Tssr90102 9 63666802 to 63666813 11 - TSS region transcription start site region 90102
Tssr90103 9 63666823 to 63666845 22 - TSS region transcription start site region 90103
Tssr90104 9 63667550 to 63667568 18 - TSS region transcription start site region 90104
Tssr85582 9 63690768 to 63690816 48 + TSS region transcription start site region 85582
Tssr90105 9 63706416 to 63706430 14 - TSS region transcription start site region 90105
Tssr90106 9 63711983 to 63711994 11 - TSS region transcription start site region 90106
Tssr90107 9 63714743 to 63714769 26 - TSS region transcription start site region 90107
Tssr90108 9 63719041 to 63719046 5 - TSS region transcription start site region 90108
Tssr85583 9 63719256 to 63719292 36 + TSS region transcription start site region 85583
Tssr85584 9 63731620 to 63731639 19 + TSS region transcription start site region 85584