MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:63411455-63612493

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm16759	9	63399376 to 63480667	81291	+	lncRNA gene	predicted gene, 16759
Iqch	9	63421455 to 63602493	181038	-	protein coding gene	IQ motif containing H
Gm25995	9	63442319 to 63442460	141	+	snRNA gene	predicted gene, 25995
D9Bwg1371	9	63443118 to 63443421	303		DNA segment	DNA segment, Chr 9, Brigham & Women's Genetics 1371
Gm6257	9	63443166 to 63444075	909	-	pseudogene	predicted gene 6257
Gm35809	9	63480686 to 63534004	53318	+	lncRNA gene	predicted gene, 35809
D9Mit338	9	63487095 to 63487219	124		DNA segment	DNA Segment, Chr 9 Massachusetts Institute of Technology 338
Tssr2906	9	63500725 to 63500729	4	+	TSS region	transcription start site region 2906
Gm39358	9	63565519 to 63571734	6215	+	lncRNA gene	predicted gene, 39358
Cpgi21916	9	63602051 to 63603129	1078		CpG island	CpG island 21916
Tssr90098	9	63602449 to 63602460	11	-	TSS region	transcription start site region 90098
Tssr90099	9	63602464 to 63602494	30	-	TSS region	transcription start site region 90099
Tssr90100	9	63602496 to 63602505	9	-	TSS region	transcription start site region 90100
Aagab	9	63602628 to 63641897	39269	+	protein coding gene	alpha- and gamma-adaptin binding protein
Tssr85581	9	63602650 to 63602703	53	+	TSS region	transcription start site region 85581
D9Dcr1	9	63603875 to 63603970	95		DNA segment	DNA segment, Chr 9, Derry C. Roopenian 1
D9Mit106	9	63603876 to 63603974	98		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 106
avc3	9	63603876 to 68829021	5225145		heritable phenotypic marker	atrioventricular canal 3