Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:63141224-63421240

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae9 9 49508998 to 63332570 13823572 QTL experimental allergic encephalomyelitis susceptibility 9
Feml2 9 57600000 to 63300000 5700000 QTL femur length in high growth mice 2
Skor1 9 63138170 to 63148961 10791 - protein coding gene SKI family transcriptional corepressor 1
Cpgi21910 9 63141876 to 63142852 976 CpG island CpG island 21910
Cpgi21911 9 63143251 to 63147124 3873 CpG island CpG island 21911
Cpgi21912 9 63148339 to 63149796 1457 CpG island CpG island 21912
Tssr2903 9 63148915 to 63148934 19 - TSS region transcription start site region 2903
Tssr90083 9 63149178 to 63149183 5 - TSS region transcription start site region 90083
Cpgi21913 9 63150169 to 63150606 437 CpG island CpG island 21913
Map2k5 9 63163768 to 63377902 214134 - protein coding gene mitogen-activated protein kinase kinase 5
Tssr90084 9 63197359 to 63197395 36 - TSS region transcription start site region 90084
Tssr2904 9 63221016 to 63221020 4 + TSS region transcription start site region 2904
Tssr90085 9 63223147 to 63223163 16 - TSS region transcription start site region 90085
Tssr90086 9 63281224 to 63281240 16 - TSS region transcription start site region 90086
Tssr90087 9 63281260 to 63281271 11 - TSS region transcription start site region 90087
Tssr85580 9 63281325 to 63281360 35 + TSS region transcription start site region 85580
Gm39355 9 63291534 to 63292775 1241 - lncRNA gene predicted gene, 39355
Tssr90088 9 63322789 to 63322814 25 - TSS region transcription start site region 90088
D9Mit105 9 63332429 to 63332570 141 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 105
Tssr2905 9 63333638 to 63333646 8 + TSS region transcription start site region 2905
Cpgi21914 9 63377267 to 63378139 872 CpG island CpG island 21914
Tssr90089 9 63377624 to 63377766 142 - TSS region transcription start site region 90089
Tssr90090 9 63377814 to 63377829 15 - TSS region transcription start site region 90090
Tssr90091 9 63377835 to 63377914 79 - TSS region transcription start site region 90091
Tssr90092 9 63377960 to 63377980 20 - TSS region transcription start site region 90092
Tssr90093 9 63384772 to 63384798 26 - TSS region transcription start site region 90093
2300009A05Rik 9 63394447 to 63399244 4797 - protein coding gene RIKEN cDNA 2300009A05 gene
Cpgi21915 9 63398628 to 63399688 1060 CpG island CpG island 21915
Tssr90094 9 63399031 to 63399062 31 - TSS region transcription start site region 90094
Tssr90095 9 63399064 to 63399140 76 - TSS region transcription start site region 90095
Tssr90096 9 63399216 to 63399262 46 - TSS region transcription start site region 90096
Tssr90097 9 63399264 to 63399302 38 - TSS region transcription start site region 90097
Gm16759 9 63399376 to 63480667 81291 + lncRNA gene predicted gene, 16759
W10q13 9 120362868 to 63332429 -57030439 QTL weight 10 weeks QTL 13
Tailaq2 9 120362868 to 63332429 -57030439 QTL tail length adjusted QTL 2
Splq4 9 120362868 to 63332429 -57030439 QTL spleen weight QTL 4