Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Eae9 | 9 | 13823572 | QTL | experimental allergic encephalomyelitis susceptibility 9 | ||
Feml2 | 9 | 5700000 | QTL | femur length in high growth mice 2 | ||
Cpgi21900 | 9 | 1309 | CpG island | CpG island 21900 | ||
Tssr85556 | 9 | 10 | + | TSS region | transcription start site region 85556 | |
Tssr85557 | 9 | 15 | + | TSS region | transcription start site region 85557 | |
Itga11 | 9 | 106124 | + | protein coding gene | integrin alpha 11 | |
Tssr85558 | 9 | 48 | + | TSS region | transcription start site region 85558 | |
Tssr85559 | 9 | 14 | + | TSS region | transcription start site region 85559 | |
Tssr85560 | 9 | 19 | + | TSS region | transcription start site region 85560 | |
Gm7653 | 9 | 507 | + | pseudogene | predicted gene 7653 | |
Tssr90064 | 9 | 6 | - | TSS region | transcription start site region 90064 | |
Fem1b | 9 | 19824 | - | protein coding gene | feminization 1 homolog b (C. elegans) | |
Tssr90065 | 9 | 39 | - | TSS region | transcription start site region 90065 | |
Tssr90066 | 9 | 4 | - | TSS region | transcription start site region 90066 | |
Tssr90067 | 9 | 38 | - | TSS region | transcription start site region 90067 | |
Tssr90068 | 9 | 16 | - | TSS region | transcription start site region 90068 | |
Gm26609 | 9 | 3756 | + | lincRNA gene | predicted gene, 26609 | |
Tssr90069 | 9 | 9 | - | TSS region | transcription start site region 90069 | |
Cpgi21901 | 9 | 1450 | CpG island | CpG island 21901 | ||
Tssr90070 | 9 | 50 | - | TSS region | transcription start site region 90070 | |
Tssr90071 | 9 | 67 | - | TSS region | transcription start site region 90071 | |
Tssr90072 | 9 | 5 | - | TSS region | transcription start site region 90072 | |
Tssr90073 | 9 | 7 | - | TSS region | transcription start site region 90073 | |
Tssr90074 | 9 | 11 | - | TSS region | transcription start site region 90074 | |
Tssr90075 | 9 | 89 | - | TSS region | transcription start site region 90075 | |
Tssr90076 | 9 | 37 | - | TSS region | transcription start site region 90076 | |
Tssr90077 | 9 | 35 | - | TSS region | transcription start site region 90077 | |
Tssr85561 | 9 | 11 | + | TSS region | transcription start site region 85561 | |
Tssr85562 | 9 | 14 | + | TSS region | transcription start site region 85562 | |
Cpgi21902 | 9 | 324 | CpG island | CpG island 21902 | ||
Tssr85563 | 9 | 26 | + | TSS region | transcription start site region 85563 | |
Cpgi21903 | 9 | 786 | CpG island | CpG island 21903 | ||
Tssr85564 | 9 | 24 | + | TSS region | transcription start site region 85564 | |
Tssr85565 | 9 | 18 | + | TSS region | transcription start site region 85565 | |
Tssr85566 | 9 | 40 | + | TSS region | transcription start site region 85566 | |
Tssr85567 | 9 | 49 | + | TSS region | transcription start site region 85567 | |
Cln6 | 9 | 13215 | + | protein coding gene | ceroid-lipofuscinosis, neuronal 6 | |
Tssr85568 | 9 | 55 | + | TSS region | transcription start site region 85568 | |
Gm10653 | 9 | 20547 | - | pseudogene | predicted gene 10653 | |
Tssr85569 | 9 | 21 | + | TSS region | transcription start site region 85569 | |
Tssr85570 | 9 | 4 | + | TSS region | transcription start site region 85570 | |
Tssr2901 | 9 | 19 | + | TSS region | transcription start site region 2901 | |
Tssr85571 | 9 | 7 | + | TSS region | transcription start site region 85571 | |
Tssr85572 | 9 | 25 | + | TSS region | transcription start site region 85572 | |
Tssr85573 | 9 | 31 | + | TSS region | transcription start site region 85573 | |
Gm47274 | 9 | 396 | + | pseudogene | predicted gene, 47274 | |
Cpgi21904 | 9 | 182 | CpG island | CpG island 21904 | ||
Calml4 | 9 | 17841 | + | protein coding gene | calmodulin-like 4 | |
Tssr85574 | 9 | 53 | + | TSS region | transcription start site region 85574 | |
Tssr85575 | 9 | 9 | + | TSS region | transcription start site region 85575 | |
Tssr85576 | 9 | 51 | + | TSS region | transcription start site region 85576 | |
Tssr85577 | 9 | 11 | + | TSS region | transcription start site region 85577 | |
Tssr2902 | 9 | 1 | + | TSS region | transcription start site region 2902 | |
Pias1 | 9 | 102513 | - | protein coding gene | protein inhibitor of activated STAT 1 | |
Tssr90078 | 9 | 4 | - | TSS region | transcription start site region 90078 | |
Cpgi21905 | 9 | 1420 | CpG island | CpG island 21905 | ||
Gm35574 | 9 | 29557 | + | lncRNA gene | predicted gene, 35574 | |
Tssr90079 | 9 | 28 | - | TSS region | transcription start site region 90079 | |
Tssr90080 | 9 | 5 | - | TSS region | transcription start site region 90080 | |
Tssr90081 | 9 | 26 | - | TSS region | transcription start site region 90081 | |
D9Mit317 | 9 | 133 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology-317 | ||
Gm24526 | 9 | 157 | + | snRNA gene | predicted gene, 24526 | |
Gm39354 | 9 | 6463 | + | lncRNA gene | predicted gene, 39354 | |
Tssr85578 | 9 | 4 | + | TSS region | transcription start site region 85578 | |
Gm48193 | 9 | 2706 | - | lincRNA gene | predicted gene, 48193 | |
Gm35658 | 9 | 14817 | + | lncRNA gene | predicted gene, 35658 | |
Tssr85579 | 9 | 25 | + | TSS region | transcription start site region 85579 | |
Cpgi21906 | 9 | 497 | CpG island | CpG island 21906 | ||
Tssr90082 | 9 | 29 | - | TSS region | transcription start site region 90082 | |
Gm6082 | 9 | 453 | + | pseudogene | predicted gene 6082 | |
Cpgi21907 | 9 | 495 | CpG island | CpG island 21907 | ||
Cpgi21908 | 9 | 1077 | CpG island | CpG island 21908 | ||
Gm25064 | 9 | 106 | + | snRNA gene | predicted gene, 25064 | |
Skor1 | 9 | 10791 | - | protein coding gene | SKI family transcriptional corepressor 1 | |
Cpgi21909 | 9 | 556 | CpG island | CpG island 21909 | ||
Cpgi21910 | 9 | 976 | CpG island | CpG island 21910 | ||
Cpgi21911 | 9 | 3873 | CpG island | CpG island 21911 | ||
Cpgi21912 | 9 | 1457 | CpG island | CpG island 21912 | ||
Tssr2903 | 9 | 19 | - | TSS region | transcription start site region 2903 | |
Tssr90083 | 9 | 5 | - | TSS region | transcription start site region 90083 | |
Cpgi21913 | 9 | 437 | CpG island | CpG island 21913 | ||
Map2k5 | 9 | 214134 | - | protein coding gene | mitogen-activated protein kinase kinase 5 | |
Tssr90084 | 9 | 36 | - | TSS region | transcription start site region 90084 | |
Tssr2904 | 9 | 4 | + | TSS region | transcription start site region 2904 | |
Tssr90085 | 9 | 16 | - | TSS region | transcription start site region 90085 | |
Tssr90086 | 9 | 16 | - | TSS region | transcription start site region 90086 | |
Tssr90087 | 9 | 11 | - | TSS region | transcription start site region 90087 | |
Tssr85580 | 9 | 35 | + | TSS region | transcription start site region 85580 | |
Gm39355 | 9 | 1241 | - | lncRNA gene | predicted gene, 39355 | |
Tssr90088 | 9 | 25 | - | TSS region | transcription start site region 90088 | |
D9Mit105 | 9 | 141 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 105 | ||
Tssr2905 | 9 | 8 | + | TSS region | transcription start site region 2905 | |
Cpgi21914 | 9 | 872 | CpG island | CpG island 21914 | ||
Tssr90089 | 9 | 142 | - | TSS region | transcription start site region 90089 | |
Tssr90090 | 9 | 15 | - | TSS region | transcription start site region 90090 | |
Tssr90091 | 9 | 79 | - | TSS region | transcription start site region 90091 | |
Tssr90092 | 9 | 20 | - | TSS region | transcription start site region 90092 | |
Tssr90093 | 9 | 26 | - | TSS region | transcription start site region 90093 | |
2300009A05Rik | 9 | 4797 | - | protein coding gene | RIKEN cDNA 2300009A05 gene | |
Cpgi21915 | 9 | 1060 | CpG island | CpG island 21915 | ||
Tssr90094 | 9 | 31 | - | TSS region | transcription start site region 90094 | |
Tssr90095 | 9 | 76 | - | TSS region | transcription start site region 90095 | |
Tssr90096 | 9 | 46 | - | TSS region | transcription start site region 90096 | |
Tssr90097 | 9 | 38 | - | TSS region | transcription start site region 90097 | |
Gm16759 | 9 | 81291 | + | lncRNA gene | predicted gene, 16759 | |
Iqch | 9 | 181038 | - | protein coding gene | IQ motif containing H | |
Gm25995 | 9 | 141 | + | snRNA gene | predicted gene, 25995 | |
D9Bwg1371 | 9 | 303 | DNA segment | DNA segment, Chr 9, Brigham & Women's Genetics 1371 | ||
Gm6257 | 9 | 909 | - | pseudogene | predicted gene 6257 | |
Gm35809 | 9 | 53318 | + | lncRNA gene | predicted gene, 35809 | |
D9Mit338 | 9 | 124 | DNA segment | DNA Segment, Chr 9 Massachusetts Institute of Technology 338 | ||
Tssr2906 | 9 | 4 | + | TSS region | transcription start site region 2906 | |
Gm39358 | 9 | 6215 | + | lncRNA gene | predicted gene, 39358 | |
Cpgi21916 | 9 | 1078 | CpG island | CpG island 21916 | ||
Tssr90098 | 9 | 11 | - | TSS region | transcription start site region 90098 | |
Tssr90099 | 9 | 30 | - | TSS region | transcription start site region 90099 | |
Tssr90100 | 9 | 9 | - | TSS region | transcription start site region 90100 | |
Aagab | 9 | 39269 | + | protein coding gene | alpha- and gamma-adaptin binding protein | |
Tssr85581 | 9 | 53 | + | TSS region | transcription start site region 85581 | |
D9Dcr1 | 9 | 95 | DNA segment | DNA segment, Chr 9, Derry C. Roopenian 1 | ||
D9Mit106 | 9 | 98 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 106 | ||
avc3 | 9 | 5225145 | heritable phenotypic marker | atrioventricular canal 3 | ||
Smad3 | 9 | 111227 | - | protein coding gene | SMAD family member 3 | |
Tssr90101 | 9 | 7 | - | TSS region | transcription start site region 90101 | |
Tssr90102 | 9 | 11 | - | TSS region | transcription start site region 90102 | |
Tssr90103 | 9 | 22 | - | TSS region | transcription start site region 90103 | |
Tssr90104 | 9 | 18 | - | TSS region | transcription start site region 90104 | |
Tssr85582 | 9 | 48 | + | TSS region | transcription start site region 85582 | |
Tssr90105 | 9 | 14 | - | TSS region | transcription start site region 90105 | |
Tssr90106 | 9 | 11 | - | TSS region | transcription start site region 90106 | |
Tssr90107 | 9 | 26 | - | TSS region | transcription start site region 90107 | |
Tssr90108 | 9 | 5 | - | TSS region | transcription start site region 90108 | |
Tssr85583 | 9 | 36 | + | TSS region | transcription start site region 85583 | |
Tssr85584 | 9 | 19 | + | TSS region | transcription start site region 85584 | |
Tssr85585 | 9 | 20 | + | TSS region | transcription start site region 85585 | |
Tssr90109 | 9 | 3 | - | TSS region | transcription start site region 90109 | |
Tssr90110 | 9 | 41 | - | TSS region | transcription start site region 90110 | |
Tssr90111 | 9 | 3 | - | TSS region | transcription start site region 90111 | |
Cpgi21917 | 9 | 1773 | CpG island | CpG island 21917 | ||
Tssr90112 | 9 | 14 | - | TSS region | transcription start site region 90112 | |
Tssr90113 | 9 | 31 | - | TSS region | transcription start site region 90113 | |
Tssr90114 | 9 | 19 | - | TSS region | transcription start site region 90114 | |
Gm35941 | 9 | 7944 | - | lncRNA gene | predicted gene, 35941 | |
D9Mit31 | 9 | 126 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 31 | ||
D9Mit245 | 9 | 194 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 245 | ||
Gm39359 | 9 | 1699 | - | lncRNA gene | predicted gene, 39359 | |
Gm2553 | 9 | 604 | - | pseudogene | predicted gene 2553 | |
Tssr90115 | 9 | 3 | - | TSS region | transcription start site region 90115 | |
Tssr85586 | 9 | 10 | + | TSS region | transcription start site region 85586 | |
D9Mit175 | 9 | 131 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 175 | ||
Gm18541 | 9 | 537 | + | pseudogene | predicted gene, 18541 | |
Tailaq2 | 9 | -57030439 | QTL | tail length adjusted QTL 2 | ||
W10q13 | 9 | -57030439 | QTL | weight 10 weeks QTL 13 | ||
Splq4 | 9 | -57030439 | QTL | spleen weight QTL 4 |