MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:60609743-60689745

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lrrc49	9	60587224 to 60688322	101098	-	protein coding gene	leucine rich repeat containing 49
Tssr89991	9	60649674 to 60649677	3	-	TSS region	transcription start site region 89991
Tssr89992	9	60649686 to 60649740	54	-	TSS region	transcription start site region 89992
Tssr89993	9	60649743 to 60649745	2	-	TSS region	transcription start site region 89993
Tssr89994	9	60649749 to 60649790	41	-	TSS region	transcription start site region 89994
Tssr89995	9	60649793 to 60649805	12	-	TSS region	transcription start site region 89995
Tssr89996	9	60649867 to 60649878	11	-	TSS region	transcription start site region 89996
Tssr85486	9	60671960 to 60671965	5	+	TSS region	transcription start site region 85486
Tssr89997	9	60680975 to 60680979	4	-	TSS region	transcription start site region 89997
Tssr2894	9	60687443 to 60687452	9	-	TSS region	transcription start site region 2894
Tssr89998	9	60687459 to 60687485	26	-	TSS region	transcription start site region 89998
B930082K07Rik	9	60687719 to 60690397	2678	+	lincRNA gene	RIKEN cDNA B930082K07 gene
Cpgi21871	9	60687803 to 60688158	355		CpG island	CpG island 21871
Tssr89999	9	60687877 to 60687946	69	-	TSS region	transcription start site region 89999
Tssr90000	9	60687959 to 60687974	15	-	TSS region	transcription start site region 90000
Tssr90001	9	60688034 to 60688053	19	-	TSS region	transcription start site region 90001
Tssr90002	9	60688065 to 60688082	17	-	TSS region	transcription start site region 90002
Tssr90003	9	60688128 to 60688184	56	-	TSS region	transcription start site region 90003