Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
repro36 | 9 | 10294689 | heritable phenotypic marker | reproductive mutant 36, JAX Reproductive Mutagenesis Program | ||
Gm20275 | 9 | 113962 | - | antisense lncRNA gene | predicted gene, 20275 | |
Tssr89962 | 9 | 9 | - | TSS region | transcription start site region 89962 | |
Tssr89963 | 9 | 24 | - | TSS region | transcription start site region 89963 | |
Tssr89964 | 9 | 22 | - | TSS region | transcription start site region 89964 | |
Tssr85477 | 9 | 20 | + | TSS region | transcription start site region 85477 | |
Tssr85478 | 9 | 30 | + | TSS region | transcription start site region 85478 | |
Tssr85479 | 9 | 10 | + | TSS region | transcription start site region 85479 | |
Nr2e3 | 9 | 17888 | - | protein coding gene | nuclear receptor subfamily 2, group E, member 3 | |
Tssr89965 | 9 | 24 | - | TSS region | transcription start site region 89965 | |
Tssr89966 | 9 | 20 | - | TSS region | transcription start site region 89966 | |
Tssr89967 | 9 | 11 | - | TSS region | transcription start site region 89967 | |
Tssr89968 | 9 | 13 | - | TSS region | transcription start site region 89968 | |
Tssr89969 | 9 | 12 | - | TSS region | transcription start site region 89969 | |
Tssr89970 | 9 | 10 | - | TSS region | transcription start site region 89970 | |
Tssr89971 | 9 | 13 | - | TSS region | transcription start site region 89971 | |
Tssr89972 | 9 | 11 | - | TSS region | transcription start site region 89972 | |
Tssr89973 | 9 | 54 | - | TSS region | transcription start site region 89973 | |
Tssr85480 | 9 | 12 | + | TSS region | transcription start site region 85480 | |
Gm7616 | 9 | 7750 | + | antisense lncRNA gene | predicted gene 7616 | |
Gm15507 | 9 | 4290 | - | lincRNA gene | predicted gene 15507 | |
Thsd4 | 9 | 555115 | - | protein coding gene | thrombospondin, type I, domain containing 4 | |
Tssr89974 | 9 | 36 | - | TSS region | transcription start site region 89974 | |
Gm23668 | 9 | 110 | - | rRNA gene | predicted gene, 23668 | |
Tssr89975 | 9 | 2 | - | TSS region | transcription start site region 89975 | |
Tssr89976 | 9 | 17 | - | TSS region | transcription start site region 89976 | |
Tssr89977 | 9 | 16 | - | TSS region | transcription start site region 89977 | |
Tssr89978 | 9 | 22 | - | TSS region | transcription start site region 89978 | |
Tssr89979 | 9 | 9 | - | TSS region | transcription start site region 89979 | |
Tssr89980 | 9 | 22 | - | TSS region | transcription start site region 89980 | |
B930001P03Rik | 9 | 1929 | unclassified gene | RIKEN cDNA B930001P03 gene | ||
Tssr89981 | 9 | 12 | - | TSS region | transcription start site region 89981 | |
Tssr89982 | 9 | 15 | - | TSS region | transcription start site region 89982 | |
5930427L02Rik | 9 | 2196 | unclassified gene | RIKEN cDNA 5930427L02 gene | ||
Cpgi21869 | 9 | 197 | CpG island | CpG island 21869 | ||
D9Mit194 | 9 | 135 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 194 | ||
Tssr85481 | 9 | 38 | + | TSS region | transcription start site region 85481 | |
2010001M07Rik | 9 | 826 | + | antisense lncRNA gene | RIKEN cDNA 2010001M07 gene | |
Tssr85482 | 9 | 9 | + | TSS region | transcription start site region 85482 | |
Gm47676 | 9 | 1964 | - | unclassified gene | predicted gene, 47676 | |
Gm22099 | 9 | 122 | + | snoRNA gene | predicted gene, 22099 | |
Tssr89983 | 9 | 19 | - | TSS region | transcription start site region 89983 | |
Tssr89984 | 9 | 9 | - | TSS region | transcription start site region 89984 | |
Tssr85483 | 9 | 27 | + | TSS region | transcription start site region 85483 | |
Tssr85484 | 9 | 10 | + | TSS region | transcription start site region 85484 | |
D9Mit103 | 9 | 147 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 103 | ||
Tssr89985 | 9 | 13 | - | TSS region | transcription start site region 89985 | |
Cpgi21870 | 9 | 1042 | CpG island | CpG island 21870 | ||
Tssr89986 | 9 | 16 | - | TSS region | transcription start site region 89986 | |
Tssr89987 | 9 | 41 | - | TSS region | transcription start site region 89987 | |
Tssr89988 | 9 | 7 | - | TSS region | transcription start site region 89988 | |
9230112J17Rik | 9 | 21915 | - | lincRNA gene | RIKEN cDNA 9230112J17 gene | |
Tssr85485 | 9 | 9 | + | TSS region | transcription start site region 85485 | |
Gm49334 | 9 | 18616 | + | lincRNA gene | predicted gene, 49334 | |
Gm47740 | 9 | 594 | + | pseudogene | predicted gene, 47740 | |
Gm33406 | 9 | 6492 | + | lncRNA gene | predicted gene, 33406 | |
Tssr89989 | 9 | 25 | - | TSS region | transcription start site region 89989 | |
Gm17853 | 9 | 1348 | + | pseudogene | predicted gene, 17853 | |
D9Mit207 | 9 | 146 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 207 | ||
Stheal8 | 9 | 146 | QTL | soft tissue heal 8 | ||
Heal28 | 9 | 146 | QTL | wound healing/regeneration 28 | ||
Lrrc49 | 9 | 101098 | - | protein coding gene | leucine rich repeat containing 49 | |
Tssr2893 | 9 | 3 | + | TSS region | transcription start site region 2893 | |
Tssr89990 | 9 | 12 | - | TSS region | transcription start site region 89990 | |
Tssr89991 | 9 | 3 | - | TSS region | transcription start site region 89991 | |
Tssr89992 | 9 | 54 | - | TSS region | transcription start site region 89992 | |
Tssr89993 | 9 | 2 | - | TSS region | transcription start site region 89993 | |
Tssr89994 | 9 | 41 | - | TSS region | transcription start site region 89994 | |
Tssr89995 | 9 | 12 | - | TSS region | transcription start site region 89995 | |
Tssr89996 | 9 | 11 | - | TSS region | transcription start site region 89996 | |
Tssr85486 | 9 | 5 | + | TSS region | transcription start site region 85486 | |
Tssr89997 | 9 | 4 | - | TSS region | transcription start site region 89997 | |
Tssr2894 | 9 | 9 | - | TSS region | transcription start site region 2894 | |
Tssr89998 | 9 | 26 | - | TSS region | transcription start site region 89998 | |
B930082K07Rik | 9 | 2678 | + | lincRNA gene | RIKEN cDNA B930082K07 gene | |
Cpgi21871 | 9 | 355 | CpG island | CpG island 21871 | ||
Tssr89999 | 9 | 69 | - | TSS region | transcription start site region 89999 | |
Tssr90000 | 9 | 15 | - | TSS region | transcription start site region 90000 | |
Tssr90001 | 9 | 19 | - | TSS region | transcription start site region 90001 | |
Tssr90002 | 9 | 17 | - | TSS region | transcription start site region 90002 | |
Tssr90003 | 9 | 56 | - | TSS region | transcription start site region 90003 | |
Cpgi21872 | 9 | 1157 | CpG island | CpG island 21872 | ||
Tssr85487 | 9 | 54 | + | TSS region | transcription start site region 85487 | |
Larp6 | 9 | 25680 | + | protein coding gene | La ribonucleoprotein domain family, member 6 | |
Cpgi21873 | 9 | 235 | CpG island | CpG island 21873 | ||
Cpgi21874 | 9 | 210 | CpG island | CpG island 21874 | ||
1700036A12Rik | 9 | 2367 | + | lincRNA gene | RIKEN cDNA 1700036A12 gene | |
Cpgi21875 | 9 | 993 | CpG island | CpG island 21875 | ||
Tssr85488 | 9 | 109 | + | TSS region | transcription start site region 85488 | |
Uaca | 9 | 85828 | + | protein coding gene | uveal autoantigen with coiled-coil domains and ankyrin repeats | |
Tssr85489 | 9 | 35 | + | TSS region | transcription start site region 85489 | |
Gm9869 | 9 | 16648 | - | antisense lncRNA gene | predicted gene 9869 | |
Tssr85490 | 9 | 19 | + | TSS region | transcription start site region 85490 | |
Tssr85491 | 9 | 59 | + | TSS region | transcription start site region 85491 | |
Tssr85492 | 9 | 34 | + | TSS region | transcription start site region 85492 | |
Tssr85493 | 9 | 12 | + | TSS region | transcription start site region 85493 | |
Tssr85494 | 9 | 13 | + | TSS region | transcription start site region 85494 | |
Tssr85495 | 9 | 14 | + | TSS region | transcription start site region 85495 | |
Gm33643 | 9 | 4885 | - | lncRNA gene | predicted gene, 33643 | |
Tssr85496 | 9 | 51 | + | TSS region | transcription start site region 85496 | |
Tssr85497 | 9 | 4 | + | TSS region | transcription start site region 85497 | |
Gm47923 | 9 | 30150 | + | lincRNA gene | predicted gene, 47923 | |
Gm5122 | 9 | 2728 | + | lincRNA gene | predicted gene 5122 | |
Gm39348 | 9 | 4474 | - | lincRNA gene | predicted gene, 39348 | |
Gm33699 | 9 | 4751 | + | lincRNA gene | predicted gene, 33699 | |
Tssr85498 | 9 | 14 | + | TSS region | transcription start site region 85498 | |
Cpgi21876 | 9 | 241 | CpG island | CpG island 21876 | ||
Gm46116 | 9 | 2247 | + | lncRNA gene | predicted gene, 46116 | |
D9Mit143 | 9 | 141 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 143 | ||
Cpgi21877 | 9 | 156 | CpG island | CpG island 21877 | ||
Gm34004 | 9 | 34812 | + | lincRNA gene | predicted gene, 34004 | |
D9Mit72 | 9 | 132 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 72 | ||
4933433G08Rik | 9 | 2373 | - | lincRNA gene | RIKEN cDNA 4933433G08 gene | |
Tssr90004 | 9 | 12 | - | TSS region | transcription start site region 90004 | |
Gm33914 | 9 | 17412 | - | lincRNA gene | predicted gene, 33914 | |
Tssr85499 | 9 | 32 | + | TSS region | transcription start site region 85499 | |
I730028E13Rik | 9 | 6744 | + | lincRNA gene | RIKEN cDNA I730028E13 gene | |
Tssr85500 | 9 | 21 | + | TSS region | transcription start site region 85500 | |
Tssr2895 | 9 | 19 | + | TSS region | transcription start site region 2895 | |
Tssr85501 | 9 | 2 | + | TSS region | transcription start site region 85501 | |
Gm34105 | 9 | 6236 | + | lincRNA gene | predicted gene, 34105 | |
Tssr85502 | 9 | 18 | + | TSS region | transcription start site region 85502 | |
B930092H01Rik | 9 | 34582 | - | lincRNA gene | RIKEN cDNA B930092H01 gene | |
Gm34264 | 9 | 16328 | - | lncRNA gene | predicted gene, 34264 | |
Cpgi21878 | 9 | 252 | CpG island | CpG island 21878 | ||
Gm39349 | 9 | 9245 | + | lncRNA gene | predicted gene, 39349 | |
Tssr2896 | 9 | 3 | + | TSS region | transcription start site region 2896 | |
Cpgi21879 | 9 | 468 | CpG island | CpG island 21879 | ||
Gm34157 | 9 | 812 | - | lncRNA gene | predicted gene, 34157 | |
Tssr90005 | 9 | 49 | - | TSS region | transcription start site region 90005 | |
Cpgi21880 | 9 | 1139 | CpG island | CpG island 21880 | ||
Tssr85503 | 9 | 38 | + | TSS region | transcription start site region 85503 | |
Gm10655 | 9 | 1396 | - | lincRNA gene | predicted gene 10655 | |
Cpgi21881 | 9 | 2539 | CpG island | CpG island 21881 | ||
Tssr90006 | 9 | 24 | - | TSS region | transcription start site region 90006 | |
Tssr85504 | 9 | 11 | + | TSS region | transcription start site region 85504 | |
Tssr85505 | 9 | 24 | + | TSS region | transcription start site region 85505 | |
Tle3 | 9 | 46131 | + | protein coding gene | transducin-like enhancer of split 3 | |
Tssr85506 | 9 | 16 | + | TSS region | transcription start site region 85506 | |
Tssr85507 | 9 | 13 | + | TSS region | transcription start site region 85507 | |
Tssr85508 | 9 | 39 | + | TSS region | transcription start site region 85508 | |
Tssr85509 | 9 | 16 | + | TSS region | transcription start site region 85509 | |
Tssr85510 | 9 | 42 | + | TSS region | transcription start site region 85510 | |
Tssr85511 | 9 | 9 | + | TSS region | transcription start site region 85511 | |
Tssr85512 | 9 | 8 | + | TSS region | transcription start site region 85512 | |
Tcq13 | 9 | -49270000 | QTL | total cholesterol QTL 13 |