Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:59659459-59759468

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pkm 9 59656368 to 59679375 23007 + protein coding gene pyruvate kinase, muscle
Tssr85459 9 59659603 to 59659609 6 + TSS region transcription start site region 85459
1700043A12Rik 9 59660383 to 59661159 776 unclassified gene RIKEN cDNA 1700043A12 gene
Tssr85460 9 59661460 to 59661512 52 + TSS region transcription start site region 85460
Tssr89959 9 59664344 to 59664357 13 - TSS region transcription start site region 89959
Tssr85461 9 59665157 to 59665194 37 + TSS region transcription start site region 85461
Tssr85462 9 59665305 to 59665329 24 + TSS region transcription start site region 85462
Tssr85463 9 59668904 to 59668921 17 + TSS region transcription start site region 85463
Gm49759 9 59672814 to 59676700 3886 + unclassified gene predicted gene, 49759
Tssr85464 9 59676906 to 59676929 23 + TSS region transcription start site region 85464
Tssr85465 9 59677071 to 59677086 15 + TSS region transcription start site region 85465
Tssr85466 9 59679829 to 59679845 16 + TSS region transcription start site region 85466
Cpgi21866 9 59679838 to 59680786 948 CpG island CpG island 21866
Gramd2 9 59680144 to 59718874 38730 + protein coding gene GRAM domain containing 2
Tssr85467 9 59680171 to 59680184 13 + TSS region transcription start site region 85467
Tssr85468 9 59680189 to 59680207 18 + TSS region transcription start site region 85468
Tssr89960 9 59680788 to 59680814 26 - TSS region transcription start site region 89960
Cpgi21867 9 59691697 to 59692053 356 CpG island CpG island 21867
Tssr2892 9 59707594 to 59707612 18 + TSS region transcription start site region 2892
Tssr85469 9 59709459 to 59709468 9 + TSS region transcription start site region 85469
Gm39347 9 59714280 to 59726769 12489 - lncRNA gene predicted gene, 39347
Senp8 9 59734259 to 59750649 16390 - protein coding gene SUMO/sentrin specific peptidase 8
Cpgi21868 9 59750405 to 59751859 1454 CpG island CpG island 21868
Tssr89961 9 59750616 to 59750644 28 - TSS region transcription start site region 89961
Tssr85470 9 59750851 to 59750857 6 + TSS region transcription start site region 85470
Tssr85471 9 59750876 to 59750918 42 + TSS region transcription start site region 85471
Myo9a 9 59750896 to 59928866 177970 + protein coding gene myosin IXa
Tssr85472 9 59750932 to 59750935 3 + TSS region transcription start site region 85472
Tssr85473 9 59750951 to 59750999 48 + TSS region transcription start site region 85473
Tssr85474 9 59751142 to 59751225 83 + TSS region transcription start site region 85474
Tssr85475 9 59751250 to 59751268 18 + TSS region transcription start site region 85475